DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
GKENN
Uniprot ID:
Q5HYR2
Source protein:
Doublesex- and mab-3-related transcription factor C1
Source gene:
DMRTC1; DMRTC1B
Class:
DEG_APCC_KENBOX_2
Location:
23:27
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5204
ASA_SCORE:
89.6
COIL:
0.7508
CONS_SCORE:
0.6695
DSS_SCORE:
0.5109
HELIX:
0.138
FCONS_SCORE:
1.0084
RIG_SCORE:
0.7014
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G23V
TCGA-97-A4M0
LUAD
TCGA
GKENN
DEG_APCC_KENBOX_2
0.6421
p.G23V
DO218935
LUAD
ICGC
GKENN
DEG_APCC_KENBOX_2
0.6421
p.K24N
TCGA-AJ-A3EK
UCEC
TCGA
GKENN
DEG_APCC_KENBOX_2
0.6918
p.K24N
DO41584
UCEC
ICGC
GKENN
DEG_APCC_KENBOX_2
0.6918
p.R17K
DO228664
LICA
ICGC
GKENN
DEG_APCC_KENBOX_2
0.1667
p.R17K
DO228664
LICA
ICGC
GKENN
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with DMRTC1; DMRTC1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GKENN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q3YBR2
Transforming growth factor beta regulator 1
DEG_APCC_KENBOX_2
144:148
GKENN
APC,CDC20,FZR1
0.8614
More...
Q9H2G2
STE20-like serine/threonine-protein kinase
DEG_APCC_KENBOX_2
450:454
GKENN
APC,CDC20,FZR1
0.995
More...
Q5HYR2
Doublesex- and mab-3-related transcription factor C1
DEG_APCC_KENBOX_2
23:27
GKENN
APC,CDC20,FZR1
0.5204
More...