DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GKENV
Uniprot ID:
Q9H307
Source protein:
Pinin
Source gene:
PNN
Class:
DEG_APCC_KENBOX_2
Location:
445:449
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5717
ASA_SCORE:
105.82
COIL:
0.8844
CONS_SCORE:
0.1953
DSS_SCORE:
0.6736
HELIX:
0.0904
FCONS_SCORE:
0.9139
RIG_SCORE:
0.6247
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D436H
TCGA-50-5066
LUAD
TCGA
GKENV
DEG_APCC_KENBOX_2
0.0833
p.D436H
DO25040
LUAD
ICGC
GKENV
DEG_APCC_KENBOX_2
0.0833
p.S443F
TCGA-EO-A22U
UCEC
TCGA
GKENV
DEG_APCC_KENBOX_2
0.7222
p.S443F
DO43755
UCEC
ICGC
GKENV
DEG_APCC_KENBOX_2
0.7222
p.T441S
DO229010
COCA
ICGC
GKENV
DEG_APCC_KENBOX_2
0.6667
p.T441S
DO229013
COCA
ICGC
GKENV
DEG_APCC_KENBOX_2
0.6667
p.T441S
DO229016
COCA
ICGC
GKENV
DEG_APCC_KENBOX_2
0.6667
p.T441S
DO229003
COCA
ICGC
GKENV
DEG_APCC_KENBOX_2
0.6667
p.T441S
DO229005
COCA
ICGC
GKENV
DEG_APCC_KENBOX_2
0.6667
p.K437E
DO231758
LINC
ICGC
GKENV
DEG_APCC_KENBOX_2
0.2222
p.T441I
DO220876
MELA
ICGC
GKENV
DEG_APCC_KENBOX_2
0.6667
p.N448K
DO222749
MELA
ICGC
GKENV
DEG_APCC_KENBOX_2
0.6918
Drug responses associated with PNN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GKENV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P17027
Zinc finger protein 23
DEG_APCC_KENBOX_2
62:66
GKENV
APC,CDC20,FZR1
0.9286
More...
Q7Z7M9
Polypeptide N-acetylgalactosaminyltransferase 5
DEG_APCC_KENBOX_2
87:91
GKENV
APC,CDC20,FZR1
0.9247
More...
Q9H307
Pinin
DEG_APCC_KENBOX_2
445:449
GKENV
APC,CDC20,FZR1
0.5717
More...