DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LAPEPEETWVVEM
Uniprot ID:
Q495Y8
Source protein:
Speedy protein E2
Source gene:
SPDYE2
Class:
DEG_ODPH_VHL_1
Location:
86:98
E3 ligase:
VHL
DEGRON score:
0.9791
ASA_SCORE:
78.3
COIL:
0.6215
CONS_SCORE:
0.6542
DSS_SCORE:
0.4348
HELIX:
0.2105
FCONS_SCORE:
1.421
RIG_SCORE:
0.7829
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S78Y
TCGA-2W-A8YY
CESC
TCGA
LAPEPEETWVVEM
DEG_ODPH_VHL_1
0.1111
p.S78Y
SIDM01943
Colorectal Carcinoma
GDSC
LAPEPEETWVVEM
DEG_ODPH_VHL_1
0.1111
p.L86I
TCGA-AP-A051
UCEC
TCGA
LAPEPEETWVVEM
DEG_ODPH_VHL_1
0.6063
p.L86I
DO42673
UCEC
ICGC
LAPEPEETWVVEM
DEG_ODPH_VHL_1
0.6063
p.A87T
TCGA-EA-A3HU
CESC
TCGA
LAPEPEETWVVEM
DEG_ODPH_VHL_1
0.7139
p.A87T
DO6320
CESC
ICGC
LAPEPEETWVVEM
DEG_ODPH_VHL_1
0.7139
p.E92D
TCGA-EO-A3B0
UCEC
TCGA
LAPEPEETWVVEM
DEG_ODPH_VHL_1
0.5647
p.E92D
DO219773
UCEC
ICGC
LAPEPEETWVVEM
DEG_ODPH_VHL_1
0.5647
p.E91Q
TCGA-VS-A9UZ
CESC
TCGA
LAPEPEETWVVEM
DEG_ODPH_VHL_1
0.5633
p.E91Q
DO51646
CESC
ICGC
LAPEPEETWVVEM
DEG_ODPH_VHL_1
0.5633
p.K107R
DO227477
LAML
ICGC
LAPEPEETWVVEM
DEG_ODPH_VHL_1
0.1944
p.K107R
DO224558
LUSC
ICGC
LAPEPEETWVVEM
DEG_ODPH_VHL_1
0.1944
p.V96A
DO229058
LICA
ICGC
LAPEPEETWVVEM
DEG_ODPH_VHL_1
0.6936
Drug responses associated with SPDYE2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LAPEPEETWVVEM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NHP3
Speedy protein E2B
DEG_ODPH_VHL_1
86:98
LAPEPEETWVVEM
VHL
0.9787
More...
A6NIY4
Speedy protein E5
DEG_ODPH_VHL_1
86:98
LAPEPEETWVVEM
VHL
0.9466
More...
P0CI01
Speedy protein E6
DEG_ODPH_VHL_1
86:98
LAPEPEETWVVEM
VHL
0.9765
More...
Q495Y8
Speedy protein E2
DEG_ODPH_VHL_1
86:98
LAPEPEETWVVEM
VHL
0.9791
More...
A6NJR5
Putative speedy protein-like protein 3
DEG_ODPH_VHL_1
46:58
LAPEPEETWVVEM
VHL
0.8647
More...