DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGTPGPS
Uniprot ID:
Q99687
Source protein:
Homeobox protein Meis3
Source gene:
MEIS3
Class:
DEG_SCF_FBW7_1
Location:
215:221
E3 ligase:
FBXW7
DEGRON score:
0.9896
ASA_SCORE:
51.6714
COIL:
0.8187
CONS_SCORE:
0.347
DSS_SCORE:
0.733
HELIX:
0.0404
FCONS_SCORE:
1.0672
RIG_SCORE:
0.5389
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S212Y
TCGA-19-5956
GBM
TCGA
LGTPGPS
DEG_SCF_FBW7_1
0.25
p.S212Y
DO13863
GBM
ICGC
LGTPGPS
DEG_SCF_FBW7_1
0.25
p.G223R
TCGA-49-6767
LUAD
TCGA
LGTPGPS
DEG_SCF_FBW7_1
0.2778
p.G223R
DO23586
LUAD
ICGC
LGTPGPS
DEG_SCF_FBW7_1
0.2778
p.S221A
TCGA-D1-A3JP
UCEC
TCGA
LGTPGPS
DEG_SCF_FBW7_1
0.7588
p.S221A
DO219769
UCEC
ICGC
LGTPGPS
DEG_SCF_FBW7_1
0.7588
p.H207N
TCGA-EE-A181
SKCM
TCGA
LGTPGPS
DEG_SCF_FBW7_1
0.1111
p.H207N
DO37444
SKCM
ICGC
LGTPGPS
DEG_SCF_FBW7_1
0.1111
p.S222I
TCGA-NC-A5HJ
LUSC
TCGA
LGTPGPS
DEG_SCF_FBW7_1
0.3056
p.S222I
DO219189
LUSC
ICGC
LGTPGPS
DEG_SCF_FBW7_1
0.3056
p.P220L
DO220877
MELA
ICGC
LGTPGPS
DEG_SCF_FBW7_1
0.6471
p.P220L
DO222837
MELA
ICGC
LGTPGPS
DEG_SCF_FBW7_1
0.6471
p.G224D
SIDM01662
Plasma Cell Myeloma
GDSC
LGTPGPS
DEG_SCF_FBW7_1
0.25
p.G223V
SIDM01662
Plasma Cell Myeloma
GDSC
LGTPGPS
DEG_SCF_FBW7_1
0.2778
p.A226S
ACH-000887
Brain Cancer
CCLE
LGTPGPS
DEG_SCF_FBW7_1
0.1944
p.S229F
H513
pleura
COSMIC
LGTPGPS
DEG_SCF_FBW7_1
0.1111
Drug responses associated with MEIS3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGTPGPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q16799
Reticulon-1
DEG_SCF_FBW7_1
143:149
LGTPGPS
FBXW7
0.999
More...
Q99687
Homeobox protein Meis3
DEG_SCF_FBW7_1
215:221
LGTPGPS
FBXW7
0.9896
More...
A6NDR6
Putative homeobox protein Meis3-like 1
DEG_SCF_FBW7_1
114:120
LGTPGPS
FBXW7
0.912
More...
A8K0S8
Putative homeobox protein Meis3-like 2
DEG_SCF_FBW7_1
198:204
LGTPGPS
FBXW7
0.7944
More...