DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LIR
Uniprot ID:
Q6UXY1
Source protein:
Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2
Source gene:
BAIAP2L2
Class:
DEG_APCC_TPR_1
Location:
527:529
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9383
ASA_SCORE:
131.7
COIL:
0.9417
CONS_SCORE:
0.594
DSS_SCORE:
0.9122
HELIX:
0.0333
FCONS_SCORE:
0.8739
RIG_SCORE:
0.7913
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R529H
TCGA-BR-4361
STAD
TCGA
LIR
DEG_APCC_TPR_1
0.8244
p.R529H
DO38887
STAD
ICGC
LIR
DEG_APCC_TPR_1
0.8244
p.R529L
DO229003
COCA
ICGC
LIR
DEG_APCC_TPR_1
0.8428
p.R529L
SIDM00373
Endometrial Carcinoma
GDSC
LIR
DEG_APCC_TPR_1
0.8428
p.R529L
SIDM00607
Glioblastoma
GDSC
LIR
DEG_APCC_TPR_1
0.8428
p.R529L
SIDM00296
Small Cell Lung Carcinoma
GDSC
LIR
DEG_APCC_TPR_1
0.8428
p.R529L
SIDM00381
Cervical Carcinoma
GDSC
LIR
DEG_APCC_TPR_1
0.8428
p.R529L
SIDM01446
Glioblastoma
GDSC
LIR
DEG_APCC_TPR_1
0.8428
p.T518N
DO228976
LICA
ICGC
LIR
DEG_APCC_TPR_1
0.0833
p.R523H
SIDM01173
Rhabdomyosarcoma
GDSC
LIR
DEG_APCC_TPR_1
0.2222
p.R523H
ACH-000772
Sarcoma
CCLE
LIR
DEG_APCC_TPR_1
0.2222
p.R523H
TE-441-T
soft_tissue
COSMIC
LIR
DEG_APCC_TPR_1
0.2222
Drug responses associated with BAIAP2L2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LIR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q07820
Induced myeloid leukemia cell differentiation protein Mcl-1
DEG_APCC_TPR_1
348:350
LIR
APC,CDC20,FZR1
0.8085
More...
Q6UXY1
Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2
DEG_APCC_TPR_1
527:529
LIR
APC,CDC20,FZR1
0.9383
More...
Q9Y330
Zinc finger and BTB domain-containing protein 12
DEG_APCC_TPR_1
457:459
LIR
APC,CDC20,FZR1
0.8469
More...