DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LIR
Uniprot ID:
Q9Y330
Source protein:
Zinc finger and BTB domain-containing protein 12
Source gene:
ZBTB12
Class:
DEG_APCC_TPR_1
Location:
457:459
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8469
ASA_SCORE:
135.7333
COIL:
0.967
CONS_SCORE:
0.4018
DSS_SCORE:
0.6636
HELIX:
0.006
FCONS_SCORE:
0.7415
RIG_SCORE:
0.8801
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R459C
TCGA-B5-A3FC
UCEC
TCGA
LIR
DEG_APCC_TPR_1
0.8301
p.R459C
DO41871
UCEC
ICGC
LIR
DEG_APCC_TPR_1
0.8301
p.E448V
TCGA-GD-A2C5
BLCA
TCGA
LIR
DEG_APCC_TPR_1
0.0833
p.E448V
DO496
BLCA
ICGC
LIR
DEG_APCC_TPR_1
0.0833
p.E448K
SIDM00952
B-Cell Non-Hodgkin's Lymphoma
GDSC
LIR
DEG_APCC_TPR_1
0.0833
p.E448K
ACH-002220
Lymphoma
CCLE
LIR
DEG_APCC_TPR_1
0.0833
p.E448K
CRO-AP2
haematopoietic_and_lymphoid_tissue
COSMIC
LIR
DEG_APCC_TPR_1
0.0833
p.I458S
ACH-001190
Skin Cancer
CCLE
LIR
DEG_APCC_TPR_1
0.7341
Drug responses associated with ZBTB12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LIR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q07820
Induced myeloid leukemia cell differentiation protein Mcl-1
DEG_APCC_TPR_1
348:350
LIR
APC,CDC20,FZR1
0.8085
More...
Q6UXY1
Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2
DEG_APCC_TPR_1
527:529
LIR
APC,CDC20,FZR1
0.9383
More...
Q9Y330
Zinc finger and BTB domain-containing protein 12
DEG_APCC_TPR_1
457:459
LIR
APC,CDC20,FZR1
0.8469
More...