DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LKENA
Uniprot ID:
Q70EL4
Source protein:
Ubiquitin carboxyl-terminal hydrolase 43
Source gene:
USP43
Class:
DEG_APCC_KENBOX_2
Location:
915:919
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.943
ASA_SCORE:
96.82
COIL:
0.667
CONS_SCORE:
0.2946
DSS_SCORE:
0.6452
HELIX:
0.3158
FCONS_SCORE:
1.076
RIG_SCORE:
0.6942
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q921H
TCGA-G5-6233
READ
TCGA
LKENA
DEG_APCC_KENBOX_2
0.2778
p.Q921H
DO36626
READ
ICGC
LKENA
DEG_APCC_KENBOX_2
0.2778
p.S906L
DO233745
GACA
ICGC
LKENA
DEG_APCC_KENBOX_2
0.0833
p.G920E
SIDM01016
T-Lymphoblastic Leukemia
GDSC
LKENA
DEG_APCC_KENBOX_2
0.3056
p.G920E
ACH-000995
Leukemia
CCLE
LKENA
DEG_APCC_KENBOX_2
0.3056
p.G920E
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
LKENA
DEG_APCC_KENBOX_2
0.3056
p.L928V
NCI-H2196
lung
COSMIC
LKENA
DEG_APCC_KENBOX_2
0.1944
p.G915E
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
LKENA
DEG_APCC_KENBOX_2
0.7199
Drug responses associated with USP43 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P07949
Proto-oncogene tyrosine-protein kinase receptor Ret
DEG_APCC_KENBOX_2
760:764
LKENA
APC,CDC20,FZR1
0.715
More...
Q70EL4
Ubiquitin carboxyl-terminal hydrolase 43
DEG_APCC_KENBOX_2
915:919
LKENA
APC,CDC20,FZR1
0.943
More...
Q9NQG7
Hermansky-Pudlak syndrome 4 protein
DEG_APCC_KENBOX_2
293:297
LKENA
APC,CDC20,FZR1
0.7258
More...