DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKENK
Uniprot ID:
Q8N3K9
Source protein:
Cardiomyopathy-associated protein 5
Source gene:
CMYA5
Class:
DEG_APCC_KENBOX_2
Location:
3016:3020
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9733
ASA_SCORE:
127.92
COIL:
0.8678
CONS_SCORE:
0.6198
DSS_SCORE:
0.5914
HELIX:
0.1142
FCONS_SCORE:
1.3189
RIG_SCORE:
0.6895
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K3012N
TCGA-D9-A6EC
SKCM
TCGA
LKENK
DEG_APCC_KENBOX_2
0.3333
p.K3012N
DO50291
SKCM
ICGC
LKENK
DEG_APCC_KENBOX_2
0.3333
p.S3006N
DO224559
LAML
ICGC
LKENK
DEG_APCC_KENBOX_2
0.0556
p.H3025D
SIDM01070
Non-Small Cell Lung Carcinoma
GDSC
LKENK
DEG_APCC_KENBOX_2
0.1944
p.H3025D
ACH-000840
Lung Cancer
CCLE
LKENK
DEG_APCC_KENBOX_2
0.1944
p.H3025D
HCC-366
lung
COSMIC
LKENK
DEG_APCC_KENBOX_2
0.1944
p.E3030D
SIDM00193
Colorectal Carcinoma
GDSC
LKENK
DEG_APCC_KENBOX_2
0.0556
p.E3030D
ACH-000991
Colon/Colorectal Cancer
CCLE
LKENK
DEG_APCC_KENBOX_2
0.0556
p.E3030D
SNU-81
large_intestine
COSMIC
LKENK
DEG_APCC_KENBOX_2
0.0556
p.K3012Q
SIDM01510
Non-Small Cell Lung Carcinoma
GDSC
LKENK
DEG_APCC_KENBOX_2
0.3333
p.K3012Q
ACH-000925
Lung Cancer
CCLE
LKENK
DEG_APCC_KENBOX_2
0.3333
p.T3024A
ACH-001610
Brain Cancer
CCLE
LKENK
DEG_APCC_KENBOX_2
0.2222
p.N3019S
ACH-001692
Head and Neck Cancer
CCLE
LKENK
DEG_APCC_KENBOX_2
0.7069
Drug responses associated with CMYA5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12888
TP53-binding protein 1
DEG_APCC_KENBOX_2
84:88
LKENK
APC,CDC20,FZR1
0.9912
More...
Q8N3K9
Cardiomyopathy-associated protein 5
DEG_APCC_KENBOX_2
3016:3020
LKENK
APC,CDC20,FZR1
0.9733
More...
Q96J02
E3 ubiquitin-protein ligase Itchy homolog
DEG_APCC_KENBOX_2
29:33
LKENK
APC,CDC20,FZR1
0.5521
More...