DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKENK
Uniprot ID:
Q96J02
Source protein:
E3 ubiquitin-protein ligase Itchy homolog
Source gene:
ITCH
Class:
DEG_APCC_KENBOX_2
Location:
29:33
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5521
ASA_SCORE:
89.08
COIL:
0.7148
CONS_SCORE:
0.4471
DSS_SCORE:
0.3068
HELIX:
0.134
FCONS_SCORE:
0.9372
RIG_SCORE:
0.773
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V43I
TCGA-A5-A1OF
UCEC
TCGA
LKENK
DEG_APCC_KENBOX_2
0.0556
p.V43I
DO42568
UCEC
ICGC
LKENK
DEG_APCC_KENBOX_2
0.0556
p.Q21E
TCGA-XF-A9SZ
BLCA
TCGA
LKENK
DEG_APCC_KENBOX_2
0.1111
p.Q21E
DO51919
BLCA
ICGC
LKENK
DEG_APCC_KENBOX_2
0.1111
p.V43L
DO228985
LICA
ICGC
LKENK
DEG_APCC_KENBOX_2
0.0556
p.P41L
SIDM01105
Melanoma
GDSC
LKENK
DEG_APCC_KENBOX_2
0.1111
p.P41L
SK-MEL-3
skin
COSMIC
LKENK
DEG_APCC_KENBOX_2
0.1111
p.K33M
ACH-001061
Colon/Colorectal Cancer
CCLE
LKENK
DEG_APCC_KENBOX_2
0.6951
Drug responses associated with ITCH mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12888
TP53-binding protein 1
DEG_APCC_KENBOX_2
84:88
LKENK
APC,CDC20,FZR1
0.9912
More...
Q8N3K9
Cardiomyopathy-associated protein 5
DEG_APCC_KENBOX_2
3016:3020
LKENK
APC,CDC20,FZR1
0.9733
More...
Q96J02
E3 ubiquitin-protein ligase Itchy homolog
DEG_APCC_KENBOX_2
29:33
LKENK
APC,CDC20,FZR1
0.5521
More...