DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LLLFKD
Uniprot ID:
Q9HAW4
Source protein:
Claspin
Source gene:
CLSPN
Class:
LIG_APCC_ABBA_1
Location:
725:730
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9862
ASA_SCORE:
92.7833
COIL:
0.409
CONS_SCORE:
0.4653
DSS_SCORE:
0.3632
HELIX:
0.5033
FCONS_SCORE:
1.5182
RIG_SCORE:
0.8004
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L727R
TCGA-AX-A05Z
UCEC
TCGA
LLLFKD
LIG_APCC_ABBA_1
0.8428
p.S723Y
TCGA-AZ-4315
COAD
TCGA
LLLFKD
LIG_APCC_ABBA_1
0.7222
p.G736S
TCGA-B5-A3FA
UCEC
TCGA
LLLFKD
LIG_APCC_ABBA_1
0.1667
p.Q728K
DO44037
BLCA
ICGC
LLLFKD
LIG_APCC_ABBA_1
0.6944
p.P737H
DO223703
COAD
ICGC
LLLFKD
LIG_APCC_ABBA_1
0.1389
p.P724T
DO229015
LICA
ICGC
LLLFKD
LIG_APCC_ABBA_1
0.75
p.S718Y
DO229035
LICA
ICGC
LLLFKD
LIG_APCC_ABBA_1
0.5833
p.A739S
DO51795
STAD
ICGC
LLLFKD
LIG_APCC_ABBA_1
0.0833
p.G732E
DO51761
STAD
ICGC
LLLFKD
LIG_APCC_ABBA_1
0.2778
p.G732V
DO41235
UCEC
ICGC
LLLFKD
LIG_APCC_ABBA_1
0.2778
Drug responses associated with CLSPN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LLLFKD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96JH8
Ras-associating and dilute domain-containing protein
LIG_APCC_ABBA_1
352:357
LLLFKD
APC,CDC20,FZR1
0.7772
More...
Q9HAW4
Claspin
LIG_APCC_ABBA_1
725:730
LLLFKD
APC,CDC20,FZR1
0.9862
More...
Q9Y3C4
EKC/KEOPS complex subunit TPRKB
LIG_APCC_ABBA_1
17:22
LLLFKD
APC,CDC20,FZR1
0.6529
More...