DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSPFSE
Uniprot ID:
Q70EL1
Source protein:
Inactive ubiquitin carboxyl-terminal hydrolase 54
Source gene:
USP54
Class:
LIG_APCC_ABBA_1
Location:
602:607
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9347
ASA_SCORE:
84.1333
COIL:
0.8362
CONS_SCORE:
0.4128
DSS_SCORE:
0.4939
HELIX:
0.1315
FCONS_SCORE:
0.8596
RIG_SCORE:
0.6991
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q605H
DO42280
UCEC
ICGC
LSPFSE
LIG_APCC_ABBA_1
0.7582
p.L602V
SIDM01062
Breast Carcinoma
GDSC
LSPFSE
LIG_APCC_ABBA_1
0.5654
p.L602V
ACH-000643
Breast Cancer
CCLE
LSPFSE
LIG_APCC_ABBA_1
0.5654
p.L602V
HDQ-P1
breast
COSMIC
LSPFSE
LIG_APCC_ABBA_1
0.5654
p.R608Q
DO41331
UCEC
ICGC
LSPFSE
LIG_APCC_ABBA_1
0.3056
p.R600M
DO223732
CESC
ICGC
LSPFSE
LIG_APCC_ABBA_1
0.2778
p.A599D
DO229025
LICA
ICGC
LSPFSE
LIG_APCC_ABBA_1
0.25
p.R594S
TCGA-77-8136
LUSC
TCGA
LSPFSE
LIG_APCC_ABBA_1
0.1111
p.D592E
ACH-001201
Brain Cancer
CCLE
LSPFSE
LIG_APCC_ABBA_1
0.0556
Showing 1 to 9 of 9 entries
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Drug responses associated with USP54 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of LSPFSE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q70EL1
Inactive ubiquitin carboxyl-terminal hydrolase 54
LIG_APCC_ABBA_1
602:607
LSPFSE
APC,CDC20,FZR1
0.9347
More...
Q2NL68
Proline and serine-rich protein 3
LIG_APCC_ABBA_1
236:241
LSPFSE
APC,CDC20,FZR1
0.9736
More...
P10586
Receptor-type tyrosine-protein phosphatase F
LIG_APCC_ABBA_1
379:384
LSPFSE
APC,CDC20,FZR1
0.783
More...
Showing 1 to 3 of 3 entries
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