DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPLSS
Uniprot ID:
Q9UPX0
Source protein:
Protein turtle homolog B
Source gene:
IGSF9B
Class:
DEG_SCF_FBW7_1
Location:
912:917
E3 ligase:
FBXW7
DEGRON score:
0.9978
ASA_SCORE:
80.55
COIL:
0.9008
CONS_SCORE:
0.2823
DSS_SCORE:
0.5513
HELIX:
0.0597
FCONS_SCORE:
0.8071
RIG_SCORE:
0.645
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L912R
TCGA-VQ-A8DZ
STAD
TCGA
LTPLSS
DEG_SCF_FBW7_1
0.8428
p.L912R
DO51755
STAD
ICGC
LTPLSS
DEG_SCF_FBW7_1
0.8428
p.P914S
TCGA-WE-A8ZQ
SKCM
TCGA
LTPLSS
DEG_SCF_FBW7_1
0.6752
p.P914S
DO51288
SKCM
ICGC
LTPLSS
DEG_SCF_FBW7_1
0.6752
p.T913I
DO227979
COCA
ICGC
LTPLSS
DEG_SCF_FBW7_1
0.7078
p.S917F
ACH-002024
Colon/Colorectal Cancer
CCLE
LTPLSS
DEG_SCF_FBW7_1
0.9093
Drug responses associated with IGSF9B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPLSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPX0
Protein turtle homolog B
DEG_SCF_FBW7_1
912:917
LTPLSS
FBXW7
0.9978
More...
Q9H2A3
Neurogenin-2
DEG_SCF_FBW7_1
30:35
LTPLSS
FBXW7
0.977
More...
Q6ZP01
RNA-binding protein 44
DEG_SCF_FBW7_1
127:132
LTPLSS
FBXW7
0.87
More...