DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NKENF
Uniprot ID:
P04839
Source protein:
Cytochrome b-245 heavy chain
Source gene:
CYBB
Class:
DEG_APCC_KENBOX_2
Location:
566:570
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9935
ASA_SCORE:
71.8
COIL:
0.7756
CONS_SCORE:
0.6797
DSS_SCORE:
0.7365
HELIX:
0.0118
FCONS_SCORE:
1.9169
RIG_SCORE:
0.78
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F570L
TCGA-A5-A0G1
UCEC
TCGA
NKENF
DEG_APCC_KENBOX_2
0.587
p.F570L
TCGA-AJ-A5DW
UCEC
TCGA
NKENF
DEG_APCC_KENBOX_2
0.587
p.F570L
DO50075
UCEC
ICGC
NKENF
DEG_APCC_KENBOX_2
0.587
p.F570L
DO42472
UCEC
ICGC
NKENF
DEG_APCC_KENBOX_2
0.587
p.G560E
DO220889
MELA
ICGC
NKENF
DEG_APCC_KENBOX_2
0.1667
p.N566K
DO35088
PACA
ICGC
NKENF
DEG_APCC_KENBOX_2
0.5806
p.V561M
SIDM01259
B-Lymphoblastic Leukemia
GDSC
NKENF
DEG_APCC_KENBOX_2
0.1944
p.V561M
SIDM00271
Gastric Carcinoma
GDSC
NKENF
DEG_APCC_KENBOX_2
0.1944
p.V561M
ACH-000351
Gastric Cancer
CCLE
NKENF
DEG_APCC_KENBOX_2
0.1944
p.V561M
ACH-001669
Leukemia
CCLE
NKENF
DEG_APCC_KENBOX_2
0.1944
p.V561M
ACH-002238
Leukemia
CCLE
NKENF
DEG_APCC_KENBOX_2
0.1944
p.V561M
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
NKENF
DEG_APCC_KENBOX_2
0.1944
p.V561M
MKN1
stomach
COSMIC
NKENF
DEG_APCC_KENBOX_2
0.1944
Drug responses associated with CYBB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NKENF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P04839
Cytochrome b-245 heavy chain
DEG_APCC_KENBOX_2
566:570
NKENF
APC,CDC20,FZR1
0.9935
More...
Q8WXH2
Junctophilin-3
DEG_APCC_KENBOX_2
661:665
NKENF
APC,CDC20,FZR1
0.5688
More...
Q9Y5S8
NADPH oxidase 1
DEG_APCC_KENBOX_2
560:564
NKENF
APC,CDC20,FZR1
0.9983
More...