DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPKTPVSS
Uniprot ID:
Q5JRC9
Source protein:
Protein FAM47A
Source gene:
FAM47A
Class:
DEG_SCF_FBW7_1
Location:
215:222
E3 ligase:
FBXW7
DEGRON score:
0.6875
ASA_SCORE:
91.4
COIL:
0.9535
CONS_SCORE:
0.2838
DSS_SCORE:
0.7243
HELIX:
0.0229
FCONS_SCORE:
0.9299
RIG_SCORE:
0.5474
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R224H
TCGA-2H-A9GF
ESCA
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.R224H
DO234093
THCA
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.V220L
TCGA-49-AARE
LUAD
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.5654
p.V220L
DO218922
LUAD
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.5654
p.P225R
TCGA-50-6593
LUAD
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.25
p.P225R
DO24100
LUAD
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.25
p.P219L
TCGA-78-7153
LUAD
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.7582
p.P219L
TCGA-AJ-A3EL
UCEC
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.7582
p.P219L
TCGA-BR-8363
STAD
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.7582
p.P219L
TCGA-D9-A4Z3
SKCM
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.7582
p.P219L
DO230311
COCA
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.7582
p.P219L
DO26347
LUAD
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.7582
p.P219L
DO47555
SKCM
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.7582
p.P219L
DO47837
STAD
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.7582
p.P219L
DO41542
UCEC
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.7582
p.P219L
SIDM00454
Rhabdomyosarcoma
GDSC
PPKTPVSS
DEG_SCF_FBW7_1
0.7582
p.P219L
ACH-000689
Sarcoma
CCLE
PPKTPVSS
DEG_SCF_FBW7_1
0.7582
p.P219L
RH-18
soft_tissue
COSMIC
PPKTPVSS
DEG_SCF_FBW7_1
0.7582
p.L211I
TCGA-AP-A1DR
UCEC
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.2222
p.L211I
DO43747
UCEC
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.2222
p.P213Q
TCGA-BF-A3DJ
SKCM
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.P213Q
DO51237
SKCM
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.T218P
TCGA-CN-A641
HNSC
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.7031
p.T218P
DO44436
HNSC
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.7031
p.T230S
TCGA-DI-A1NN
UCEC
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.1111
p.T230S
DO41911
UCEC
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.1111
p.P213L
TCGA-EO-A22R
UCEC
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.P213L
TCGA-EY-A1GQ
UCEC
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.P213L
DO43090
UCEC
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.P213L
DO42713
UCEC
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.E205K
TCGA-GN-A266
SKCM
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.0556
p.E205K
DO37432
SKCM
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.0556
p.P215H
TCGA-NC-A5HP
LUSC
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.7694
p.P215H
DO219199
LUSC
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.7694
p.R224L
TCGA-P6-A5OG
ACC
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.P213T
TCGA-Z6-A9VB
ESCA
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.V232L
DO227634
COCA
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.0556
p.E214G
DO52438
COCA
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.3056
p.P216L
DO50970
LICA
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.6471
p.P219S
DO222498
MELA
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.6752
p.G231E
DO222632
MELA
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.0833
p.P225S
DO222837
MELA
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.25
p.P215S
SIDM00619
Thyroid Gland Carcinoma
GDSC
PPKTPVSS
DEG_SCF_FBW7_1
0.6752
p.P215S
ACH-002397
Thyroid Cancer
CCLE
PPKTPVSS
DEG_SCF_FBW7_1
0.6752
p.P215S
KMH-2
thyroid
COSMIC
PPKTPVSS
DEG_SCF_FBW7_1
0.6752
p.P225L
SIDM00971
Breast Carcinoma
GDSC
PPKTPVSS
DEG_SCF_FBW7_1
0.25
p.P225L
SIDM01686
Chronic Myelogenous Leukemia
GDSC
PPKTPVSS
DEG_SCF_FBW7_1
0.25
p.P225L
ZR-75-30
breast
COSMIC
PPKTPVSS
DEG_SCF_FBW7_1
0.25
p.L211P
SIDM00431
T-Lymphoblastic Leukemia
GDSC
PPKTPVSS
DEG_SCF_FBW7_1
0.2222
p.L211P
SIDM01098
Neuroblastoma
GDSC
PPKTPVSS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with FAM47A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPKTPVSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5JRC9
Protein FAM47A
DEG_SCF_FBW7_1
215:222
PPKTPVSS
FBXW7
0.6875
More...
Q5JRC9
Protein FAM47A
DEG_SCF_FBW7_1
317:324
PPKTPVSS
FBXW7
0.8088
More...
Q5HY64
Putative protein FAM47C
DEG_SCF_FBW7_1
202:209
PPKTPVSS
FBXW7
0.9165
More...