DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPKTPVSS
Uniprot ID:
Q5JRC9
Source protein:
Protein FAM47A
Source gene:
FAM47A
Class:
DEG_SCF_FBW7_1
Location:
317:324
E3 ligase:
FBXW7
DEGRON score:
0.8088
ASA_SCORE:
92.925
COIL:
0.95
CONS_SCORE:
0.3623
DSS_SCORE:
0.7654
HELIX:
0.0216
FCONS_SCORE:
0.8259
RIG_SCORE:
0.5885
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P330T
TCGA-06-5859
GBM
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.1667
p.P330T
DO12466
GBM
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.1667
p.T332N
TCGA-56-8622
LUSC
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.1111
p.T332N
DO45449
LUSC
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.1111
p.R326C
TCGA-A6-6781
COAD
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.R326C
TCGA-CN-5369
HNSC
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.R326C
DO8447
COAD
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.R326C
DO16069
HNSC
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.R326C
ACH-001134
Lymphoma
CCLE
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.P330L
TCGA-AX-A2IN
UCEC
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.1667
p.P330L
DO42328
UCEC
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.1667
p.P330L
SIDM00971
Breast Carcinoma
GDSC
PPKTPVSS
DEG_SCF_FBW7_1
0.1667
p.P330L
ACH-000828
Breast Cancer
CCLE
PPKTPVSS
DEG_SCF_FBW7_1
0.1667
p.P330L
ZR-75-30
breast
COSMIC
PPKTPVSS
DEG_SCF_FBW7_1
0.1667
p.E307K
TCGA-BS-A0UV
UCEC
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.0556
p.E307K
TCGA-HZ-A49H
PAAD
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.0556
p.E307K
DO32799
PAAD
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.0556
p.E307K
DO42793
UCEC
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.0556
p.R314C
TCGA-EE-A20H
SKCM
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.25
p.R314C
DO37986
SKCM
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.25
p.G333E
TCGA-EE-A29T
SKCM
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.0833
p.G333E
DO37742
SKCM
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.0833
p.R314H
TCGA-L5-A4OW
ESCA
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.25
p.P317T
TCGA-P3-A6T5
HNSC
TCGA
PPKTPVSS
DEG_SCF_FBW7_1
0.7031
p.P317T
DO49066
HNSC
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.7031
p.E328K
DO230323
COCA
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.2222
p.R326H
DO233864
GACA
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.R326P
DO50917
LICA
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0.2778
p.PE327PK
DO222363
MELA
ICGC
PPKTPVSS
DEG_SCF_FBW7_1
0
p.P309T
SIDM00509
Small Cell Lung Carcinoma
GDSC
PPKTPVSS
DEG_SCF_FBW7_1
0.1111
p.P309T
ACH-000187
Lung Cancer
CCLE
PPKTPVSS
DEG_SCF_FBW7_1
0.1111
p.P309T
COR-L311
lung
COSMIC
PPKTPVSS
DEG_SCF_FBW7_1
0.1111
p.P317H
SIDM00350
Head and Neck Carcinoma
GDSC
PPKTPVSS
DEG_SCF_FBW7_1
0.7694
p.P317H
ACH-001641
Head and Neck Cancer
CCLE
PPKTPVSS
DEG_SCF_FBW7_1
0.7694
p.P317H
SAT
upper_aerodigestive_tract
COSMIC
PPKTPVSS
DEG_SCF_FBW7_1
0.7694
p.T320S
SIDM00090
Ovarian Carcinoma
GDSC
PPKTPVSS
DEG_SCF_FBW7_1
0.7116
p.K319N
SIDM01108
Non-Small Cell Lung Carcinoma
GDSC
PPKTPVSS
DEG_SCF_FBW7_1
0.5806
p.K319N
ACH-000309
Lung Cancer
CCLE
PPKTPVSS
DEG_SCF_FBW7_1
0.5806
p.K319N
SK-LU-1
lung
COSMIC
PPKTPVSS
DEG_SCF_FBW7_1
0.5806
p.P330A
SIDM00971
Breast Carcinoma
GDSC
PPKTPVSS
DEG_SCF_FBW7_1
0.1667
p.P330A
ACH-000828
Breast Cancer
CCLE
PPKTPVSS
DEG_SCF_FBW7_1
0.1667
p.P330A
ZR-75-30
breast
COSMIC
PPKTPVSS
DEG_SCF_FBW7_1
0.1667
p.P327R
SIDM00863
Burkitt's Lymphoma
GDSC
PPKTPVSS
DEG_SCF_FBW7_1
0.25
p.L313F
ACH-000877
Lymphoma
CCLE
PPKTPVSS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with FAM47A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPKTPVSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5JRC9
Protein FAM47A
DEG_SCF_FBW7_1
215:222
PPKTPVSS
FBXW7
0.6875
More...
Q5JRC9
Protein FAM47A
DEG_SCF_FBW7_1
317:324
PPKTPVSS
FBXW7
0.8088
More...
Q5HY64
Putative protein FAM47C
DEG_SCF_FBW7_1
202:209
PPKTPVSS
FBXW7
0.9165
More...