DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPTPPTT
Uniprot ID:
P48436
Source protein:
Transcription factor SOX-9
Source gene:
SOX9
Class:
DEG_SCF_FBW7_1
Location:
234:240
E3 ligase:
FBXW7
DEGRON score:
0.9992
ASA_SCORE:
79.3
COIL:
0.9744
CONS_SCORE:
0.4413
DSS_SCORE:
0.9313
HELIX:
0.0094
FCONS_SCORE:
1.2144
RIG_SCORE:
0.4713
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P235A
TCGA-B0-5109
KIRC
TCGA
PPTPPTT
DEG_SCF_FBW7_1
0.6392
p.P235A
DO18769
KIRC
ICGC
PPTPPTT
DEG_SCF_FBW7_1
0.6392
p.G248S
DO11854
GBM
ICGC
PPTPPTT
DEG_SCF_FBW7_1
0.1111
p.G248V
DO228985
LICA
ICGC
PPTPPTT
DEG_SCF_FBW7_1
0.1111
p.K249N
SIDM00151
Ovarian Carcinoma
GDSC
PPTPPTT
DEG_SCF_FBW7_1
0.5278
p.K249N
ACH-000966
Ovarian Cancer
CCLE
PPTPPTT
DEG_SCF_FBW7_1
0.5278
p.K249N
IGROV-1
ovary
COSMIC
PPTPPTT
DEG_SCF_FBW7_1
0.5278
p.Q246P
ACH-002118
Bone Cancer
CCLE
PPTPPTT
DEG_SCF_FBW7_1
0.1667
p.Q246P
EW-3
bone
COSMIC
PPTPPTT
DEG_SCF_FBW7_1
0.1667
Drug responses associated with SOX9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTPPTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48436
Transcription factor SOX-9
DEG_SCF_FBW7_1
234:240
PPTPPTT
FBXW7
0.9992
More...
P56693
Transcription factor SOX-10
DEG_SCF_FBW7_1
238:244
PPTPPTT
FBXW7
0.999
More...
P57073
Transcription factor SOX-8
DEG_SCF_FBW7_1
224:230
PPTPPTT
FBXW7
0.9977
More...