DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PVTPEPT
Uniprot ID:
Q14676
Source protein:
Mediator of DNA damage checkpoint protein 1
Source gene:
MDC1
Class:
DEG_SCF_FBW7_1
Location:
1464:1470
E3 ligase:
FBXW7
DEGRON score:
0.9908
ASA_SCORE:
96.5571
COIL:
0.9629
CONS_SCORE:
0.2944
DSS_SCORE:
0.8214
HELIX:
0.0124
FCONS_SCORE:
1.017
RIG_SCORE:
0.6236
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1469S
TCGA-AN-A0AK
BRCA
TCGA
PVTPEPT
DEG_SCF_FBW7_1
0.5641
p.R1480K
TCGA-AP-A059
UCEC
TCGA
PVTPEPT
DEG_SCF_FBW7_1
0.0556
p.D1462E
TCGA-BW-A5NP
LIHC
TCGA
PVTPEPT
DEG_SCF_FBW7_1
0.2778
p.R1480I
TCGA-DU-6392
LGG
TCGA
PVTPEPT
DEG_SCF_FBW7_1
0.0556
p.P1469H
TCGA-FD-A3N5
BLCA
TCGA
PVTPEPT
DEG_SCF_FBW7_1
0.6583
p.S1479C
DO14348
HNSC
ICGC
PVTPEPT
DEG_SCF_FBW7_1
0.0833
p.T1470M
SIDM01965
Esophageal Carcinoma
GDSC
PVTPEPT
DEG_SCF_FBW7_1
0.7423
Drug responses associated with MDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVTPEPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_SCF_FBW7_1
1382:1388
PVTPEPT
FBXW7
0.991
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_SCF_FBW7_1
1423:1429
PVTPEPT
FBXW7
0.9545
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_SCF_FBW7_1
1464:1470
PVTPEPT
FBXW7
0.9908
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_SCF_FBW7_1
1546:1552
PVTPEPT
FBXW7
0.9979
More...