DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PWTSS
Uniprot ID:
Q9NWQ4
Source protein:
G patch domain-containing protein 2-like
Source gene:
GPATCH2L
Class:
DEG_SPOP_SBC_1
Location:
176:180
E3 ligase:
SPOP
DEGRON score:
0.7902
ASA_SCORE:
75
COIL:
0.7546
CONS_SCORE:
0.5366
DSS_SCORE:
0.4143
HELIX:
0.1164
FCONS_SCORE:
0.9425
RIG_SCORE:
0.675
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R170S
TCGA-55-6979
LUAD
TCGA
PWTSS
DEG_SPOP_SBC_1
0.1667
p.R170S
DO24110
LUAD
ICGC
PWTSS
DEG_SPOP_SBC_1
0.1667
p.Q166H
TCGA-55-7994
LUAD
TCGA
PWTSS
DEG_SPOP_SBC_1
0.0556
p.Q166H
DO45311
LUAD
ICGC
PWTSS
DEG_SPOP_SBC_1
0.0556
p.R167H
TCGA-AJ-A3EL
UCEC
TCGA
PWTSS
DEG_SPOP_SBC_1
0.0833
p.R167H
DO41542
UCEC
ICGC
PWTSS
DEG_SPOP_SBC_1
0.0833
p.P176S
DO222843
MELA
ICGC
PWTSS
DEG_SPOP_SBC_1
0.6752
Drug responses associated with GPATCH2L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PWTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P40200
T-cell surface protein tactile
DEG_SPOP_SBC_1
446:450
PWTSS
SPOP
0.6584
More...
Q08211
ATP-dependent RNA helicase A
DEG_SPOP_SBC_1
341:345
PWTSS
SPOP
0.9938
More...
Q9NWQ4
G patch domain-containing protein 2-like
DEG_SPOP_SBC_1
176:180
PWTSS
SPOP
0.7902
More...