DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RKENV
Uniprot ID:
O95727
Source protein:
Cytotoxic and regulatory T-cell molecule
Source gene:
CRTAM
Class:
DEG_APCC_KENBOX_2
Location:
372:376
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8244
ASA_SCORE:
125.1
COIL:
0.7498
CONS_SCORE:
0.2784
DSS_SCORE:
0.5369
HELIX:
0.1874
FCONS_SCORE:
0.7544
RIG_SCORE:
0.7116
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H385R
TCGA-A5-A0G2
UCEC
TCGA
RKENV
DEG_APCC_KENBOX_2
0.0833
p.H385Y
TCGA-DD-AAEE
LIHC
TCGA
RKENV
DEG_APCC_KENBOX_2
0.0833
p.L381V
TCGA-EO-A22X
UCEC
TCGA
RKENV
DEG_APCC_KENBOX_2
0.1944
p.K384N
TCGA-F5-6814
READ
TCGA
RKENV
DEG_APCC_KENBOX_2
0.2222
p.K384N
SIDM00216
Colorectal Carcinoma
GDSC
RKENV
DEG_APCC_KENBOX_2
0.2222
p.K384N
ACH-000989
Colon/Colorectal Cancer
CCLE
RKENV
DEG_APCC_KENBOX_2
0.2222
p.K384N
SNU-175
large_intestine
COSMIC
RKENV
DEG_APCC_KENBOX_2
0.2222
p.E383D
SIDM00775
Non-Small Cell Lung Carcinoma
GDSC
RKENV
DEG_APCC_KENBOX_2
0.1389
p.E383D
ACH-000785
Lung Cancer
CCLE
RKENV
DEG_APCC_KENBOX_2
0.1389
p.E383D
NCI-H2126
lung
COSMIC
RKENV
DEG_APCC_KENBOX_2
0.1389
Drug responses associated with CRTAM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RKENV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95727
Cytotoxic and regulatory T-cell molecule
DEG_APCC_KENBOX_2
372:376
RKENV
APC,CDC20,FZR1
0.8244
More...
Q8NDH2
Leucine-rich repeat transmembrane protein CCDC168
DEG_APCC_KENBOX_2
3137:3141
RKENV
APC,CDC20,FZR1
0.7623
More...
Q6ZU69
Protein FAM205A
DEG_APCC_KENBOX_2
1246:1250
RKENV
APC,CDC20,FZR1
0.7358
More...