DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RLR
Uniprot ID:
Q86Y38
Source protein:
Xylosyltransferase 1
Source gene:
XYLT1
Class:
DEG_APCC_TPR_1
Location:
957:959
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9261
ASA_SCORE:
128.3667
COIL:
0.6633
CONS_SCORE:
0.3736
DSS_SCORE:
0.9121
HELIX:
0.0097
FCONS_SCORE:
1.1388
RIG_SCORE:
0.6994
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V952A
TCGA-CN-4727
HNSC
TCGA
RLR
DEG_APCC_TPR_1
0.1944
p.V952A
DO14258
HNSC
ICGC
RLR
DEG_APCC_TPR_1
0.1944
p.A951T
TCGA-DG-A2KJ
CESC
TCGA
RLR
DEG_APCC_TPR_1
0.1667
p.A951T
DO51594
CESC
ICGC
RLR
DEG_APCC_TPR_1
0.1667
Drug responses associated with XYLT1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49918
Cyclin-dependent kinase inhibitor 1C
DEG_APCC_TPR_1
314:316
RLR
APC,CDC20,FZR1
0.9942
More...
Q86Y38
Xylosyltransferase 1
DEG_APCC_TPR_1
957:959
RLR
APC,CDC20,FZR1
0.9261
More...
Q9H1B5
Xylosyltransferase 2
DEG_APCC_TPR_1
863:865
RLR
APC,CDC20,FZR1
0.7158
More...