DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RLR
Uniprot ID:
Q9H1B5
Source protein:
Xylosyltransferase 2
Source gene:
XYLT2
Class:
DEG_APCC_TPR_1
Location:
863:865
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7158
ASA_SCORE:
133.1667
COIL:
0.734
CONS_SCORE:
0.3741
DSS_SCORE:
0.9092
HELIX:
0.0117
FCONS_SCORE:
1.0254
RIG_SCORE:
0.7073
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G862R
TCGA-BR-6566
STAD
TCGA
RLR
DEG_APCC_TPR_1
0.3056
p.G862R
DO38217
STAD
ICGC
RLR
DEG_APCC_TPR_1
0.3056
p.P857S
TCGA-PG-A6IB
UCEC
TCGA
RLR
DEG_APCC_TPR_1
0.1667
p.P857S
DO52419
UCEC
ICGC
RLR
DEG_APCC_TPR_1
0.1667
Drug responses associated with XYLT2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49918
Cyclin-dependent kinase inhibitor 1C
DEG_APCC_TPR_1
314:316
RLR
APC,CDC20,FZR1
0.9942
More...
Q86Y38
Xylosyltransferase 1
DEG_APCC_TPR_1
957:959
RLR
APC,CDC20,FZR1
0.9261
More...
Q9H1B5
Xylosyltransferase 2
DEG_APCC_TPR_1
863:865
RLR
APC,CDC20,FZR1
0.7158
More...