DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENC
Uniprot ID:
Q07699
Source protein:
Sodium channel subunit beta-1
Source gene:
SCN1B
Class:
DEG_APCC_KENBOX_2
Location:
207:211
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6563
ASA_SCORE:
83.12
COIL:
0.7992
CONS_SCORE:
0.9366
DSS_SCORE:
0.3627
HELIX:
0.1198
FCONS_SCORE:
1.009
RIG_SCORE:
0.7168
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R214Q
TCGA-AX-A2H7
UCEC
TCGA
SKENC
DEG_APCC_KENBOX_2
0.25
p.R214Q
DO218896
SKCA
ICGC
SKENC
DEG_APCC_KENBOX_2
0.25
p.R214Q
DO41044
UCEC
ICGC
SKENC
DEG_APCC_KENBOX_2
0.25
p.A197V
DO1608
BRCA
ICGC
SKENC
DEG_APCC_KENBOX_2
0.0556
p.V214I
DO222905
BTCA
ICGC
SKENC
DEG_APCC_KENBOX_2
0.25
p.V214I
DO233947
GACA
ICGC
SKENC
DEG_APCC_KENBOX_2
0.25
p.E209D
DO7801
COAD
ICGC
SKENC
DEG_APCC_KENBOX_2
0.6758
p.E209D
SIDM00118
Colorectal Carcinoma
GDSC
SKENC
DEG_APCC_KENBOX_2
0.6758
p.E209D
ACH-001081
Colon/Colorectal Cancer
CCLE
SKENC
DEG_APCC_KENBOX_2
0.6758
p.E209D
HCC2998
large_intestine
COSMIC
SKENC
DEG_APCC_KENBOX_2
0.6758
p.S198L
DO8722
COAD
ICGC
SKENC
DEG_APCC_KENBOX_2
0.0833
p.L210P
DO229013
COCA
ICGC
SKENC
DEG_APCC_KENBOX_2
0.7582
p.L210P
DO229005
COCA
ICGC
SKENC
DEG_APCC_KENBOX_2
0.7582
p.L210P
DO234205
ESAD
ICGC
SKENC
DEG_APCC_KENBOX_2
0.7582
p.L210P
DO229489
LAML
ICGC
SKENC
DEG_APCC_KENBOX_2
0.7582
p.L210P
DO229505
LAML
ICGC
SKENC
DEG_APCC_KENBOX_2
0.7582
p.L210P
DO228947
LICA
ICGC
SKENC
DEG_APCC_KENBOX_2
0.7582
p.L210P
DO231114
LUSC
ICGC
SKENC
DEG_APCC_KENBOX_2
0.7582
p.L210P
DO231132
LUSC
ICGC
SKENC
DEG_APCC_KENBOX_2
0.7582
p.L210P
DO231212
LUSC
ICGC
SKENC
DEG_APCC_KENBOX_2
0.7582
p.S198I
DO233620
GACA
ICGC
SKENC
DEG_APCC_KENBOX_2
0.0833
p.S197N
DO233885
GACA
ICGC
SKENC
DEG_APCC_KENBOX_2
0.0556
p.S197N
SIDM00282
Colorectal Carcinoma
GDSC
SKENC
DEG_APCC_KENBOX_2
0.0556
p.S197N
CW-2
large_intestine
COSMIC
SKENC
DEG_APCC_KENBOX_2
0.0556
p.G216V
DO228952
LICA
ICGC
SKENC
DEG_APCC_KENBOX_2
0.1944
p.S212I
DO229036
LICA
ICGC
SKENC
DEG_APCC_KENBOX_2
0.3056
p.S211F
DO222683
MELA
ICGC
SKENC
DEG_APCC_KENBOX_2
0.7982
p.S198A
DO222702
MELA
ICGC
SKENC
DEG_APCC_KENBOX_2
0.0833
p.A217T
DO229470
SKCA
ICGC
SKENC
DEG_APCC_KENBOX_2
0.1667
p.E199K
DO37471
SKCM
ICGC
SKENC
DEG_APCC_KENBOX_2
0.1111
p.V214D
DO42384
UCEC
ICGC
SKENC
DEG_APCC_KENBOX_2
0.25
p.E218K
DO41020
UCEC
ICGC
SKENC
DEG_APCC_KENBOX_2
0.1389
p.C211Y
SIDM00700
Non-Small Cell Lung Carcinoma
GDSC
SKENC
DEG_APCC_KENBOX_2
0.5976
Drug responses associated with SCN1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENC
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A0AVK6
Transcription factor E2F8
DEG_APCC_KENBOX_2
374:378
SKENC
APC,CDC20,FZR1
0.9637
More...
O14965
Aurora kinase A
DEG_APCC_KENBOX_2
4:8
SKENC
APC,CDC20,FZR1
0.9913
More...
Q07699
Sodium channel subunit beta-1
DEG_APCC_KENBOX_2
207:211
SKENC
APC,CDC20,FZR1
0.6563
More...