DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TPEPVVPTA
Uniprot ID:
Q14676
Source protein:
Mediator of DNA damage checkpoint protein 1
Source gene:
MDC1
Class:
DEG_COP1_1
Location:
1157:1165
E3 ligase:
COP1
DEGRON score:
0.9753
ASA_SCORE:
98.5444
COIL:
0.9708
CONS_SCORE:
0.3247
DSS_SCORE:
0.738
HELIX:
0.0084
FCONS_SCORE:
0.8317
RIG_SCORE:
0.6367
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1175Y
TCGA-CR-7388
HNSC
TCGA
TPEPVVPTA
DEG_COP1_1
0.0556
p.P1166H
TCGA-D1-A177
UCEC
TCGA
TPEPVVPTA
DEG_COP1_1
0.3056
p.P1162H
DO10132
COAD
ICGC
TPEPVVPTA
DEG_COP1_1
0.7694
p.T1169P
DO11567
GBM
ICGC
TPEPVVPTA
DEG_COP1_1
0.2222
p.S1166C
DO48884
LUAD
ICGC
TPEPVVPTA
DEG_COP1_1
0.3056
p.P1152L
DO27128
LUSC
ICGC
TPEPVVPTA
DEG_COP1_1
0.1944
p.T1161A
DO51284
SKCM
ICGC
TPEPVVPTA
DEG_COP1_1
0.7139
p.P1166S
SIDM01503
Small Cell Lung Carcinoma
GDSC
TPEPVVPTA
DEG_COP1_1
0.3056
p.P1166S
ACH-000844
Lung Cancer
CCLE
TPEPVVPTA
DEG_COP1_1
0.3056
p.S1148N
SIDM01611
Endometrial Carcinoma
GDSC
TPEPVVPTA
DEG_COP1_1
0.0833
p.S1148N
ACH-000996
Endometrial/Uterine Cancer
CCLE
TPEPVVPTA
DEG_COP1_1
0.0833
Drug responses associated with MDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TPEPVVPTA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1157:1165
TPEPVVPTA
COP1
0.9753
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1239:1247
TPEPVVPTA
COP1
0.9272
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1280:1288
TPEPVVPTA
COP1
0.9928
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1608:1616
TPEPVVPTA
COP1
0.9974
More...