DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TPEPVVPTA
Uniprot ID:
Q14676
Source protein:
Mediator of DNA damage checkpoint protein 1
Source gene:
MDC1
Class:
DEG_COP1_1
Location:
1280:1288
E3 ligase:
COP1
DEGRON score:
0.9928
ASA_SCORE:
99.5667
COIL:
0.9683
CONS_SCORE:
0.3128
DSS_SCORE:
0.712
HELIX:
0.009
FCONS_SCORE:
0.982
RIG_SCORE:
0.6438
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1286L
TCGA-AP-A1DV
UCEC
TCGA
TPEPVVPTA
DEG_COP1_1
0.7582
p.R1298K
DO459
BLCA
ICGC
TPEPVVPTA
DEG_COP1_1
0.0556
p.Q1281R
DO229505
LAML
ICGC
TPEPVVPTA
DEG_COP1_1
0.7329
p.S1276P
DO229505
LAML
ICGC
TPEPVVPTA
DEG_COP1_1
0.6667
p.R1292Q
DO230525
LUSC
ICGC
TPEPVVPTA
DEG_COP1_1
0.2222
p.S1289F
DO26518
LUSC
ICGC
TPEPVVPTA
DEG_COP1_1
0.3056
Drug responses associated with MDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TPEPVVPTA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1157:1165
TPEPVVPTA
COP1
0.9753
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1239:1247
TPEPVVPTA
COP1
0.9272
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1280:1288
TPEPVVPTA
COP1
0.9928
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1608:1616
TPEPVVPTA
COP1
0.9974
More...