DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TPETVVPTA
Uniprot ID:
Q14676
Source protein:
Mediator of DNA damage checkpoint protein 1
Source gene:
MDC1
Class:
DEG_COP1_1
Location:
1321:1329
E3 ligase:
COP1
DEGRON score:
0.9928
ASA_SCORE:
96.1111
COIL:
0.967
CONS_SCORE:
0.3077
DSS_SCORE:
0.6581
HELIX:
0.0118
FCONS_SCORE:
1.0674
RIG_SCORE:
0.7035
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1313K
TCGA-90-7766
LUSC
TCGA
TPETVVPTA
DEG_COP1_1
0.1111
p.T1321I
TCGA-AJ-A3EK
UCEC
TCGA
TPETVVPTA
DEG_COP1_1
0.8189
p.S1318F
TCGA-AX-A06F
UCEC
TCGA
TPETVVPTA
DEG_COP1_1
0.6944
p.T1328I
TCGA-HU-A4GN
STAD
TCGA
TPETVVPTA
DEG_COP1_1
0.8189
p.R1331W
DO6323
CESC
ICGC
TPETVVPTA
DEG_COP1_1
0.2778
p.C1335G
DO224664
COCA
ICGC
TPETVVPTA
DEG_COP1_1
0.1667
p.R1339W
DO52256
LIHC
ICGC
TPETVVPTA
DEG_COP1_1
0.0556
p.R1331Q
DO220885
MELA
ICGC
TPETVVPTA
DEG_COP1_1
0.2778
p.P1316S
DO222749
MELA
ICGC
TPETVVPTA
DEG_COP1_1
0.1944
p.P1326T
DO42673
UCEC
ICGC
TPETVVPTA
DEG_COP1_1
0.7031
Drug responses associated with MDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TPETVVPTA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1198:1206
TPETVVPTA
COP1
0.9906
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1321:1329
TPETVVPTA
COP1
0.9928
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1444:1452
TPETVVPTA
COP1
0.9875
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1485:1493
TPETVVPTA
COP1
0.9658
More...