DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TPETVVPTA
Uniprot ID:
Q14676
Source protein:
Mediator of DNA damage checkpoint protein 1
Source gene:
MDC1
Class:
DEG_COP1_1
Location:
1485:1493
E3 ligase:
COP1
DEGRON score:
0.9658
ASA_SCORE:
98.1333
COIL:
0.9613
CONS_SCORE:
0.2676
DSS_SCORE:
0.7114
HELIX:
0.0124
FCONS_SCORE:
0.9651
RIG_SCORE:
0.6912
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1480K
TCGA-AP-A059
UCEC
TCGA
TPETVVPTA
DEG_COP1_1
0.1944
p.R1480I
TCGA-DU-6392
LGG
TCGA
TPETVVPTA
DEG_COP1_1
0.1944
p.D1503H
TCGA-EY-A1GU
UCEC
TCGA
TPETVVPTA
DEG_COP1_1
0.0556
p.S1479C
DO14348
HNSC
ICGC
TPETVVPTA
DEG_COP1_1
0.1667
p.P1494L
SIDM00712
Non-Cancerous
GDSC
TPETVVPTA
DEG_COP1_1
0.3056
p.P1494L
SIDM00713
Mesothelioma
GDSC
TPETVVPTA
DEG_COP1_1
0.3056
Drug responses associated with MDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TPETVVPTA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1198:1206
TPETVVPTA
COP1
0.9906
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1321:1329
TPETVVPTA
COP1
0.9928
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1444:1452
TPETVVPTA
COP1
0.9875
More...
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1485:1493
TPETVVPTA
COP1
0.9658
More...