DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VATPGSS
Uniprot ID:
A8CG34
Source protein:
Nuclear envelope pore membrane protein POM 121C
Source gene:
POM121C
Class:
DEG_SCF_FBW7_1
Location:
1095:1101
E3 ligase:
FBXW7
DEGRON score:
0.9889
ASA_SCORE:
75.8286
COIL:
0.947
CONS_SCORE:
0.5567
DSS_SCORE:
0.3473
HELIX:
0.0186
FCONS_SCORE:
0.8385
RIG_SCORE:
0.6925
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1092W
DO51551
KIRP
ICGC
VATPGSS
DEG_SCF_FBW7_1
0.25
p.S1090R
DO229026
LICA
ICGC
VATPGSS
DEG_SCF_FBW7_1
0.1944
p.T1104I
DO37986
SKCM
ICGC
VATPGSS
DEG_SCF_FBW7_1
0.25
p.P1085L
ACH-000331
Lung Cancer
CCLE
VATPGSS
DEG_SCF_FBW7_1
0.0556
p.S1108G
ACH-000988
Endometrial/Uterine Cancer
CCLE
VATPGSS
DEG_SCF_FBW7_1
0.1389
p.S1108G
MFE-319
endometrium
COSMIC
VATPGSS
DEG_SCF_FBW7_1
0.1389
p.A1106V
ES8
bone
COSMIC
VATPGSS
DEG_SCF_FBW7_1
0.1944
Drug responses associated with POM121C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VATPGSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SCF_FBW7_1
1095:1101
VATPGSS
FBXW7
0.9889
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SCF_FBW7_1
1115:1121
VATPGSS
FBXW7
0.991
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SCF_FBW7_1
700:706
VATPGSS
FBXW7
0.9919
More...