DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VEMHHE
Uniprot ID:
P68104
Source protein:
Elongation factor 1-alpha 1
Source gene:
EEF1A1
Class:
LIG_APCC_ABBA_1
Location:
292:297
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8762
ASA_SCORE:
71.05
COIL:
0.3075
CONS_SCORE:
0.6349
DSS_SCORE:
0.4068
HELIX:
0.0025
FCONS_SCORE:
1.0229
RIG_SCORE:
0.8137
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S291C
TCGA-GU-AATO
BLCA
TCGA
VEMHHE
LIG_APCC_ABBA_1
0.75
p.S291C
TCGA-XF-AAMF
BLCA
TCGA
VEMHHE
LIG_APCC_ABBA_1
0.75
p.S291C
DO51930
BLCA
ICGC
VEMHHE
LIG_APCC_ABBA_1
0.75
p.S291C
DO51893
BLCA
ICGC
VEMHHE
LIG_APCC_ABBA_1
0.75
p.L299F
DO229229
THCA
ICGC
VEMHHE
LIG_APCC_ABBA_1
0.2778
p.N293S
COR-L303
lung
COSMIC
VEMHHE
LIG_APCC_ABBA_1
0.7069
Drug responses associated with EEF1A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VEMHHE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P68104
Elongation factor 1-alpha 1
LIG_APCC_ABBA_1
292:297
VEMHHE
APC,CDC20,FZR1
0.8762
More...
Q05639
Elongation factor 1-alpha 2
LIG_APCC_ABBA_1
292:297
VEMHHE
APC,CDC20,FZR1
0.9241
More...
Q5VTE0
Putative elongation factor 1-alpha-like 3
LIG_APCC_ABBA_1
292:297
VEMHHE
APC,CDC20,FZR1
0.7502
More...