DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VEMHHE
Uniprot ID:
Q05639
Source protein:
Elongation factor 1-alpha 2
Source gene:
EEF1A2
Class:
LIG_APCC_ABBA_1
Location:
292:297
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9241
ASA_SCORE:
75.8833
COIL:
0.3093
CONS_SCORE:
0.6301
DSS_SCORE:
0.3773
HELIX:
0.0018
FCONS_SCORE:
1.0188
RIG_SCORE:
0.8102
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L299Q
TCGA-33-A5GW
LUSC
TCGA
VEMHHE
LIG_APCC_ABBA_1
0.2778
p.L299Q
DO219122
LUSC
ICGC
VEMHHE
LIG_APCC_ABBA_1
0.2778
p.E288D
TCGA-49-6743
LUAD
TCGA
VEMHHE
LIG_APCC_ABBA_1
0.2222
p.E288D
DO26092
LUAD
ICGC
VEMHHE
LIG_APCC_ABBA_1
0.2222
p.S291L
TCGA-50-6592
LUAD
TCGA
VEMHHE
LIG_APCC_ABBA_1
0.75
p.S291L
DO23742
LUAD
ICGC
VEMHHE
LIG_APCC_ABBA_1
0.75
p.A298S
TCGA-58-8391
LUSC
TCGA
VEMHHE
LIG_APCC_ABBA_1
0.3056
p.A298S
DO45440
LUSC
ICGC
VEMHHE
LIG_APCC_ABBA_1
0.3056
p.D306V
TCGA-AC-A3W5
BRCA
TCGA
VEMHHE
LIG_APCC_ABBA_1
0.0833
p.D306V
DO49024
BRCA
ICGC
VEMHHE
LIG_APCC_ABBA_1
0.0833
p.E301K
TCGA-D9-A149
SKCM
TCGA
VEMHHE
LIG_APCC_ABBA_1
0.2222
p.E301K
DO37420
SKCM
ICGC
VEMHHE
LIG_APCC_ABBA_1
0.2222
p.E297K
TCGA-DJ-A13L
THCA
TCGA
VEMHHE
LIG_APCC_ABBA_1
0.7022
p.E297K
TCGA-GC-A3YS
BLCA
TCGA
VEMHHE
LIG_APCC_ABBA_1
0.7022
p.E297K
DO850
BLCA
ICGC
VEMHHE
LIG_APCC_ABBA_1
0.7022
p.E297K
DO219585
THCA
ICGC
VEMHHE
LIG_APCC_ABBA_1
0.7022
p.L299V
TCGA-G4-6315
COAD
TCGA
VEMHHE
LIG_APCC_ABBA_1
0.2778
p.L299V
DO9522
COAD
ICGC
VEMHHE
LIG_APCC_ABBA_1
0.2778
p.L303M
SIDM01197
Colorectal Carcinoma
GDSC
VEMHHE
LIG_APCC_ABBA_1
0.1667
p.L303M
SNU-C1
large_intestine
COSMIC
VEMHHE
LIG_APCC_ABBA_1
0.1667
p.A302V
SIDM00282
Colorectal Carcinoma
GDSC
VEMHHE
LIG_APCC_ABBA_1
0.1944
p.A302V
ACH-000998
Colon/Colorectal Cancer
CCLE
VEMHHE
LIG_APCC_ABBA_1
0.1944
p.A302V
CW-2
large_intestine
COSMIC
VEMHHE
LIG_APCC_ABBA_1
0.1944
p.A302T
SIDM00534
Colorectal Carcinoma
GDSC
VEMHHE
LIG_APCC_ABBA_1
0.1944
p.A302T
SIDM00901
Endometrial Carcinoma
GDSC
VEMHHE
LIG_APCC_ABBA_1
0.1944
p.A302T
ACH-000940
Endometrial/Uterine Cancer
CCLE
VEMHHE
LIG_APCC_ABBA_1
0.1944
p.A302T
ACH-000986
Colon/Colorectal Cancer
CCLE
VEMHHE
LIG_APCC_ABBA_1
0.1944
p.A302T
AN3-CA
endometrium
COSMIC
VEMHHE
LIG_APCC_ABBA_1
0.1944
p.A302T
HT-115
large_intestine
COSMIC
VEMHHE
LIG_APCC_ABBA_1
0.1944
Drug responses associated with EEF1A2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VEMHHE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P68104
Elongation factor 1-alpha 1
LIG_APCC_ABBA_1
292:297
VEMHHE
APC,CDC20,FZR1
0.8762
More...
Q05639
Elongation factor 1-alpha 2
LIG_APCC_ABBA_1
292:297
VEMHHE
APC,CDC20,FZR1
0.9241
More...
Q5VTE0
Putative elongation factor 1-alpha-like 3
LIG_APCC_ABBA_1
292:297
VEMHHE
APC,CDC20,FZR1
0.7502
More...