DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VETTT
Uniprot ID:
O43310
Source protein:
CBP80/20-dependent translation initiation factor
Source gene:
CTIF
Class:
DEG_SPOP_SBC_1
Location:
362:366
E3 ligase:
SPOP
DEGRON score:
0.8922
ASA_SCORE:
87.86
COIL:
0.864
CONS_SCORE:
0.3217
DSS_SCORE:
0.5506
HELIX:
0.0904
FCONS_SCORE:
0.7629
RIG_SCORE:
0.7539
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q371H
TCGA-4Z-AA86
BLCA
TCGA
VETTT
DEG_SPOP_SBC_1
0.3056
p.Q371H
DO218989
BLCA
ICGC
VETTT
DEG_SPOP_SBC_1
0.3056
p.V364M
TCGA-A5-A0VP
UCEC
TCGA
VETTT
DEG_SPOP_SBC_1
0.7208
p.D375G
TCGA-B7-5816
STAD
TCGA
VETTT
DEG_SPOP_SBC_1
0.0833
p.D375G
DO38599
STAD
ICGC
VETTT
DEG_SPOP_SBC_1
0.0833
p.E361K
TCGA-FR-A7U9
SKCM
TCGA
VETTT
DEG_SPOP_SBC_1
0.3056
p.E361K
DO48546
SKCM
ICGC
VETTT
DEG_SPOP_SBC_1
0.3056
p.R352Q
TCGA-VQ-A8DU
STAD
TCGA
VETTT
DEG_SPOP_SBC_1
0.0556
p.R352Q
DO51752
STAD
ICGC
VETTT
DEG_SPOP_SBC_1
0.0556
p.K374N
DO50669
ORCA
ICGC
VETTT
DEG_SPOP_SBC_1
0.2222
p.T366M
DO232940
PEME
ICGC
VETTT
DEG_SPOP_SBC_1
0.7423
p.V362M
DO42600
UCEC
ICGC
VETTT
DEG_SPOP_SBC_1
0.7208
p.K376E
SIDM01007
T-Lymphoblastic Leukemia
GDSC
VETTT
DEG_SPOP_SBC_1
0.0556
p.K376E
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
VETTT
DEG_SPOP_SBC_1
0.0556
p.K374E
ACH-002256
Leukemia
CCLE
VETTT
DEG_SPOP_SBC_1
0.2222
p.K374E
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
VETTT
DEG_SPOP_SBC_1
0.2222
Drug responses associated with CTIF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VETTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43310
CBP80/20-dependent translation initiation factor
DEG_SPOP_SBC_1
362:366
VETTT
SPOP
0.8922
More...
P34741
Syndecan-2
DEG_SPOP_SBC_1
86:90
VETTT
SPOP
0.9964
More...
Q16799
Reticulon-1
DEG_SPOP_SBC_1
292:296
VETTT
SPOP
0.9968
More...