DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKEND
Uniprot ID:
Q5QGS0
Source protein:
Neurite extension and migration factor
Source gene:
NEXMIF
Class:
DEG_APCC_KENBOX_2
Location:
23:27
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8948
ASA_SCORE:
86.4
COIL:
0.7024
CONS_SCORE:
0.4663
DSS_SCORE:
0.5481
HELIX:
0.0464
FCONS_SCORE:
1.1685
RIG_SCORE:
0.7081
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D27Y
SIDM01254
Burkitt's Lymphoma
GDSC
VKEND
DEG_APCC_KENBOX_2
0.6214
Drug responses associated with NEXMIF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKEND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P46778
60S ribosomal protein L21
DEG_APCC_KENBOX_2
109:113
VKEND
APC,CDC20,FZR1
0.5218
More...
Q5QGS0
Neurite extension and migration factor
DEG_APCC_KENBOX_2
23:27
VKEND
APC,CDC20,FZR1
0.8948
More...
Q6P587
Acylpyruvase FAHD1, mitochondrial
DEG_APCC_KENBOX_2
199:203
VKEND
APC,CDC20,FZR1
0.6039
More...