DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKSST
Uniprot ID:
Q9UQ35
Source protein:
Serine/arginine repetitive matrix protein 2
Source gene:
SRRM2
Class:
DEG_SPOP_SBC_1
Location:
1039:1043
E3 ligase:
SPOP
DEGRON score:
0.994
ASA_SCORE:
101.3
COIL:
0.9628
CONS_SCORE:
0.3522
DSS_SCORE:
0.3723
HELIX:
0.009
FCONS_SCORE:
1.0428
RIG_SCORE:
0.6302
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1047K
TCGA-B5-A3FA
UCEC
TCGA
VKSST
DEG_SPOP_SBC_1
0.2222
p.E1047K
TCGA-FD-A3NA
BLCA
TCGA
VKSST
DEG_SPOP_SBC_1
0.2222
p.E1047K
DO602
BLCA
ICGC
VKSST
DEG_SPOP_SBC_1
0.2222
p.E1047K
DO52402
UCEC
ICGC
VKSST
DEG_SPOP_SBC_1
0.2222
p.E1047K
SIDM01039
Other Solid Cancers
GDSC
VKSST
DEG_SPOP_SBC_1
0.2222
p.E1047K
SIDM00796
Head and Neck Carcinoma
GDSC
VKSST
DEG_SPOP_SBC_1
0.2222
p.E1047K
SIDM00213
Thyroid Gland Carcinoma
GDSC
VKSST
DEG_SPOP_SBC_1
0.2222
p.E1047K
SIDM00228
Thyroid Gland Carcinoma
GDSC
VKSST
DEG_SPOP_SBC_1
0.2222
p.S1032F
TCGA-GF-A3OT
SKCM
TCGA
VKSST
DEG_SPOP_SBC_1
0.5833
p.S1032F
DO47288
SKCM
ICGC
VKSST
DEG_SPOP_SBC_1
0.5833
p.S1041Y
TCGA-KL-8337
KICH
TCGA
VKSST
DEG_SPOP_SBC_1
0.8231
p.S1041Y
DO220345
KICH
ICGC
VKSST
DEG_SPOP_SBC_1
0.8231
p.L1033V
SIDM00064
Hepatocellular Carcinoma
GDSC
VKSST
DEG_SPOP_SBC_1
0.1667
p.L1033V
SIDM00002
Neuroblastoma
GDSC
VKSST
DEG_SPOP_SBC_1
0.1667
p.L1033V
SIDM01653
Non-Cancerous
GDSC
VKSST
DEG_SPOP_SBC_1
0.1667
p.L1033V
SIDM00207
Glioblastoma
GDSC
VKSST
DEG_SPOP_SBC_1
0.1667
p.L1033V
SIDM01682
Gastric Carcinoma
GDSC
VKSST
DEG_SPOP_SBC_1
0.1667
p.L1033V
SIDM01412
Oral Cavity Carcinoma
GDSC
VKSST
DEG_SPOP_SBC_1
0.1667
p.L1033V
SIDM01511
Gastric Carcinoma
GDSC
VKSST
DEG_SPOP_SBC_1
0.1667
p.L1033V
SIDM01660
Kidney Carcinoma
GDSC
VKSST
DEG_SPOP_SBC_1
0.1667
p.C1036S
SIDM00777
Colorectal Carcinoma
GDSC
VKSST
DEG_SPOP_SBC_1
0.25
p.C1036S
SIDM01161
Other Sarcomas
GDSC
VKSST
DEG_SPOP_SBC_1
0.25
p.C1036S
SIDM00899
Pancreatic Carcinoma
GDSC
VKSST
DEG_SPOP_SBC_1
0.25
p.C1036S
SIDM00130
Pancreatic Carcinoma
GDSC
VKSST
DEG_SPOP_SBC_1
0.25
p.C1036S
SIDM00309
Mesothelioma
GDSC
VKSST
DEG_SPOP_SBC_1
0.25
p.C1036S
SIDM01592
Breast Carcinoma
GDSC
VKSST
DEG_SPOP_SBC_1
0.25
p.S1034F
ACH-001100
CCLE
VKSST
DEG_SPOP_SBC_1
0.6389
p.G1051A
ACH-001134
Lymphoma
CCLE
VKSST
DEG_SPOP_SBC_1
0.1111
Drug responses associated with SRRM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZUT1
Uncharacterized protein NKAPD1
DEG_SPOP_SBC_1
140:144
VKSST
SPOP
0.964
More...
Q9UQ35
Serine/arginine repetitive matrix protein 2
DEG_SPOP_SBC_1
899:903
VKSST
SPOP
0.899
More...
Q9UQ35
Serine/arginine repetitive matrix protein 2
DEG_SPOP_SBC_1
1039:1043
VKSST
SPOP
0.994
More...