DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPIPS
Uniprot ID:
P62263
Source protein:
40S ribosomal protein S14
Source gene:
RPS14
Class:
DEG_SCF_FBW7_1
Location:
132:137
E3 ligase:
FBXW7
DEGRON score:
0.9991
ASA_SCORE:
49.8833
COIL:
0.833
CONS_SCORE:
0.8606
DSS_SCORE:
0.6471
HELIX:
0.011
FCONS_SCORE:
1.1756
RIG_SCORE:
0.7077
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P136S
TCGA-FR-A726
SKCM
TCGA
VTPIPS
DEG_SCF_FBW7_1
0.5641
p.P136S
DO48665
SKCM
ICGC
VTPIPS
DEG_SCF_FBW7_1
0.5641
p.P136S
SIDM00545
Melanoma
GDSC
VTPIPS
DEG_SCF_FBW7_1
0.5641
p.P136S
ACH-000987
Skin Cancer
CCLE
VTPIPS
DEG_SCF_FBW7_1
0.5641
p.P136S
Mewo
skin
COSMIC
VTPIPS
DEG_SCF_FBW7_1
0.5641
p.R128W
TCGA-VS-A9UJ
CESC
TCGA
VTPIPS
DEG_SCF_FBW7_1
0.2222
p.R128W
DO219735
CESC
ICGC
VTPIPS
DEG_SCF_FBW7_1
0.2222
p.R128W
DO230323
COCA
ICGC
VTPIPS
DEG_SCF_FBW7_1
0.2222
p.V132D
DO27831
MALY
ICGC
VTPIPS
DEG_SCF_FBW7_1
0.7785
p.R141H
DO49138
PACA
ICGC
VTPIPS
DEG_SCF_FBW7_1
0.2222
p.R147C
SIDM00777
Colorectal Carcinoma
GDSC
VTPIPS
DEG_SCF_FBW7_1
0.0556
p.R147C
ACH-000360
Colon/Colorectal Cancer
CCLE
VTPIPS
DEG_SCF_FBW7_1
0.0556
p.R147C
NCI-H508
large_intestine
COSMIC
VTPIPS
DEG_SCF_FBW7_1
0.0556
Drug responses associated with RPS14 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPIPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P62263
40S ribosomal protein S14
DEG_SCF_FBW7_1
132:137
VTPIPS
FBXW7
0.9991
More...
Q9HC84
Mucin-5B
DEG_SCF_FBW7_1
1980:1985
VTPIPS
FBXW7
0.7694
More...
Q9HC84
Mucin-5B
DEG_SCF_FBW7_1
4323:4328
VTPIPS
FBXW7
0.992
More...