DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPTLS
Uniprot ID:
Q8IWV1
Source protein:
Lymphocyte transmembrane adapter 1
Source gene:
LAX1
Class:
DEG_SCF_FBW7_1
Location:
4:9
E3 ligase:
FBXW7
DEGRON score:
0.5009
ASA_SCORE:
83.4667
COIL:
0.8213
CONS_SCORE:
0.5919
DSS_SCORE:
0.7347
HELIX:
0.127
FCONS_SCORE:
1.0414
RIG_SCORE:
0.7462
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D2N
TCGA-D1-A16R
UCEC
TCGA
VTPTLS
DEG_SCF_FBW7_1
0.2778
p.D2N
TCGA-EE-A2GD
SKCM
TCGA
VTPTLS
DEG_SCF_FBW7_1
0.2778
p.D2N
TCGA-W3-AA1Q
SKCM
TCGA
VTPTLS
DEG_SCF_FBW7_1
0.2778
p.D2N
DO37603
SKCM
ICGC
VTPTLS
DEG_SCF_FBW7_1
0.2778
p.D2N
DO219487
SKCM
ICGC
VTPTLS
DEG_SCF_FBW7_1
0.2778
p.D2N
DO41831
UCEC
ICGC
VTPTLS
DEG_SCF_FBW7_1
0.2778
p.G13W
TCGA-EE-A183
SKCM
TCGA
VTPTLS
DEG_SCF_FBW7_1
0.2222
p.G13W
DO37715
SKCM
ICGC
VTPTLS
DEG_SCF_FBW7_1
0.2222
p.T7N
DO233101
GACA
ICGC
VTPTLS
DEG_SCF_FBW7_1
0.5944
p.A11T
DO232027
LICA
ICGC
VTPTLS
DEG_SCF_FBW7_1
0.2778
p.G3V
DO229022
LICA
ICGC
VTPTLS
DEG_SCF_FBW7_1
0.3056
p.S18F
DO23336
LINC
ICGC
VTPTLS
DEG_SCF_FBW7_1
0.0833
p.G13E
DO222662
MELA
ICGC
VTPTLS
DEG_SCF_FBW7_1
0.2222
p.S3L
DO222702
MELA
ICGC
VTPTLS
DEG_SCF_FBW7_1
0.3056
p.S3L
DO43202
UCEC
ICGC
VTPTLS
DEG_SCF_FBW7_1
0.3056
p.S3L
DO42713
UCEC
ICGC
VTPTLS
DEG_SCF_FBW7_1
0.3056
p.A9V
DO42105
UCEC
ICGC
VTPTLS
DEG_SCF_FBW7_1
0.6936
p.A9V
DO223282
UCEC
ICGC
VTPTLS
DEG_SCF_FBW7_1
0.6936
p.F5L
COLO-792
skin
COSMIC
VTPTLS
DEG_SCF_FBW7_1
0.6981
Drug responses associated with LAX1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPTLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IWV1
Lymphocyte transmembrane adapter 1
DEG_SCF_FBW7_1
4:9
VTPTLS
FBXW7
0.5009
More...
A6NFA0
Protein FAM205C
DEG_SCF_FBW7_1
168:173
VTPTLS
FBXW7
0.8082
More...
Q6ZU69
Protein FAM205A
DEG_SCF_FBW7_1
168:173
VTPTLS
FBXW7
0.9955
More...