DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
YKENL
Uniprot ID:
P18615
Source protein:
Negative elongation factor E
Source gene:
NELFE
Class:
DEG_APCC_KENBOX_2
Location:
372:376
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7548
ASA_SCORE:
87.16
COIL:
0.5078
CONS_SCORE:
0.2365
DSS_SCORE:
0.4486
HELIX:
0.3846
FCONS_SCORE:
0.7611
RIG_SCORE:
0.8372
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y372C
TCGA-EO-A22U
UCEC
TCGA
YKENL
DEG_APCC_KENBOX_2
0.7087
p.L376F
TCGA-IB-7651
PAAD
TCGA
YKENL
DEG_APCC_KENBOX_2
0.587
p.L383F
DO46657
PAAD
ICGC
YKENL
DEG_APCC_KENBOX_2
0.1389
p.Y379C
DO43755
UCEC
ICGC
YKENL
DEG_APCC_KENBOX_2
0.25
Drug responses associated with NELFE mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P18615
Negative elongation factor E
DEG_APCC_KENBOX_2
372:376
YKENL
APC,CDC20,FZR1
0.7548
More...
P20929
Nebulin
DEG_APCC_KENBOX_2
6216:6220
YKENL
APC,CDC20,FZR1
0.7938
More...
P20929
Nebulin
DEG_APCC_KENBOX_2
6247:6251
YKENL
APC,CDC20,FZR1
0.9775
More...