DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
YKENL
Uniprot ID:
P20929
Source protein:
Nebulin
Source gene:
NEB
Class:
DEG_APCC_KENBOX_2
Location:
6216:6220
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7938
ASA_SCORE:
94.2
COIL:
0.715
CONS_SCORE:
0.3634
DSS_SCORE:
0.4548
HELIX:
0.104
FCONS_SCORE:
0.9756
RIG_SCORE:
0.7462
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V6220A
TCGA-63-5128
LUSC
TCGA
YKENL
DEG_APCC_KENBOX_2
0.6936
p.L6223M
TCGA-FD-A5C0
BLCA
TCGA
YKENL
DEG_APCC_KENBOX_2
0.25
p.L6223M
DO44046
BLCA
ICGC
YKENL
DEG_APCC_KENBOX_2
0.25
p.H6221Y
TCGA-ZF-AA4W
BLCA
TCGA
YKENL
DEG_APCC_KENBOX_2
0.3056
p.Q6208H
DO465
BLCA
ICGC
YKENL
DEG_APCC_KENBOX_2
0.1111
p.L6220V
DO50447
ESAD
ICGC
YKENL
DEG_APCC_KENBOX_2
0.5654
p.A6209T
DO233935
GACA
ICGC
YKENL
DEG_APCC_KENBOX_2
0.25
p.V6220G
DO233906
GACA
ICGC
YKENL
DEG_APCC_KENBOX_2
0.7532
p.Q6208K
DO229029
LICA
ICGC
YKENL
DEG_APCC_KENBOX_2
0.1111
p.D6224N
DO220885
MELA
ICGC
YKENL
DEG_APCC_KENBOX_2
0.2222
p.T6222A
DO36937
READ
ICGC
YKENL
DEG_APCC_KENBOX_2
0.2778
p.A6209D
SIDM00504
Glioma
GDSC
YKENL
DEG_APCC_KENBOX_2
0.25
p.A6209D
ACH-001126
Brain Cancer
CCLE
YKENL
DEG_APCC_KENBOX_2
0.25
p.A6209D
MOG-G-UVW
central_nervous_system
COSMIC
YKENL
DEG_APCC_KENBOX_2
0.25
p.L6208V
SIDM00276
Biliary Tract Carcinoma
GDSC
YKENL
DEG_APCC_KENBOX_2
0.1111
p.L6208V
SIDM01435
Hepatocellular Carcinoma
GDSC
YKENL
DEG_APCC_KENBOX_2
0.1111
p.L6208V
ETK-1
biliary_tract
COSMIC
YKENL
DEG_APCC_KENBOX_2
0.1111
p.G6218D
SIDM00793
Burkitt's Lymphoma
GDSC
YKENL
DEG_APCC_KENBOX_2
0.7198
p.I6211T
CW-2
large_intestine
COSMIC
YKENL
DEG_APCC_KENBOX_2
0.1944
Drug responses associated with NEB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P18615
Negative elongation factor E
DEG_APCC_KENBOX_2
372:376
YKENL
APC,CDC20,FZR1
0.7548
More...
P20929
Nebulin
DEG_APCC_KENBOX_2
6216:6220
YKENL
APC,CDC20,FZR1
0.7938
More...
P20929
Nebulin
DEG_APCC_KENBOX_2
6247:6251
YKENL
APC,CDC20,FZR1
0.9775
More...