DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
YKENL
Uniprot ID:
P20929
Source protein:
Nebulin
Source gene:
NEB
Class:
DEG_APCC_KENBOX_2
Location:
6247:6251
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9775
ASA_SCORE:
80.86
COIL:
0.5948
CONS_SCORE:
0.3593
DSS_SCORE:
0.4441
HELIX:
0.0656
FCONS_SCORE:
0.9918
RIG_SCORE:
0.7696
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D6250Y
TCGA-DF-A2KU
UCEC
TCGA
YKENL
DEG_APCC_KENBOX_2
0.7325
p.D6250Y
DO223286
UCEC
ICGC
YKENL
DEG_APCC_KENBOX_2
0.7325
p.L6251S
DO230312
COCA
ICGC
YKENL
DEG_APCC_KENBOX_2
0.6556
p.T6257K
DO228900
LICA
ICGC
YKENL
DEG_APCC_KENBOX_2
0.6111
p.R6237S
DO219127
LUSC
ICGC
YKENL
DEG_APCC_KENBOX_2
0.0556
p.G6252E
DO37551
SKCM
ICGC
YKENL
DEG_APCC_KENBOX_2
0.3056
p.G6254E
DO50301
SKCM
ICGC
YKENL
DEG_APCC_KENBOX_2
0.25
p.E6249D
ESS-1
endometrium
COSMIC
YKENL
DEG_APCC_KENBOX_2
0.6758
p.Q6239H
CESS
haematopoietic_and_lymphoid_tissue
COSMIC
YKENL
DEG_APCC_KENBOX_2
0.1111
Drug responses associated with NEB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P18615
Negative elongation factor E
DEG_APCC_KENBOX_2
372:376
YKENL
APC,CDC20,FZR1
0.7548
More...
P20929
Nebulin
DEG_APCC_KENBOX_2
6216:6220
YKENL
APC,CDC20,FZR1
0.7938
More...
P20929
Nebulin
DEG_APCC_KENBOX_2
6247:6251
YKENL
APC,CDC20,FZR1
0.9775
More...