Gene: TGFB3

Basic information

Tag Content
Uniprot ID A0A452DMZ7
Entrez ID 102189962
Genbank protein ID
Genbank nucleotide ID XM_005686141.3
Ensembl protein ID ENSCHIP00000001127
Ensembl nucleotide ID ENSCHIG00000001922
Gene name Transforming growth factor beta
Gene symbol TGFB3
Organism Capra hircus
NCBI taxa ID 9925
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MHLLAKPQSS GSREAAWFSS LLLHGCRGLL LPGLVAFLPG PCLKMHLQRA LVVLALLNFA 60
TVSLSMSTCT TLDFNHIKRK RVEAIRGQIL SKLRLTSPPD PSGLASIPIQ VLDLYNSTRE 120
LLEEVHGERG DVCTQANTES EYYAKEIYKF DMIQGLEEHN DLTVCPKGIT SKIFRFNVSS 180
VEKNETNLFR AEFRVFRMPN PASKRSEQRI ELFQILQPGE HIAKQRYIDG KNLPTRGTGE 240
WLSFDVTDTV REWLLRRESN LGLEISIHCP CHTFQPNGDI LENIQELMEI KFKGVDSDDD 300
PGRGDLGRLK KKKEHIPHLI LMMIPPNRLD SPGHSQRKKR ALDTNYCFRN LEENCCVRPL 360
YIDFRQDLGW KWVHEPKGYY ANFCSGPCPY LRSSDTTHST VLGLYNTLNP EASASPCCVP 420
QDLEPLTILY YVGRTPKVEQ LSNMVVKSCK CS 452

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologTGFB3538957A6QP91Bos taurusPredictionMore>>
1:1 orthologTGFB3490796F1PR85Canis lupus familiarisPredictionMore>>
1:1 orthologTGFB3102189962A0A452DMZ7Capra hircusPredictionMore>>
1:1 orthologTGFB37043P10600CPO,CL/PHomo sapiensPublicationMore>>
1:1 orthologTgfb3P17125CPOE11.5, E12.5, E14.0, E13.5, E14.5, E15.5Mus musculusPublicationMore>>
1:1 orthologTGFB3453054H2Q8N5Pan troglodytesPredictionMore>>
1:1 orthologTGFB3397400K7GSJ9Sus scrofaPredictionMore>>
1:1 orthologTgfb325717Q07258Rattus norvegicusPredictionMore>>
1:1 orthologtgfb3369195Q66I23Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0062023 collagen-containing extracellular matrix
GO:0005615 extracellular space
GO:0016021 integral component of membrane
GO:0043231 intracellular membrane-bounded organelle
GO:0008083 growth factor activity
GO:0042802 identical protein binding
GO:0050431 transforming growth factor beta binding
GO:0034713 type I transforming growth factor beta receptor binding
GO:0005114 type II transforming growth factor beta receptor binding
GO:0034714 type III transforming growth factor beta receptor binding
GO:0045216 cell-cell junction organization
GO:0070483 detection of hypoxia
GO:0060325 face morphogenesis
GO:0010936 negative regulation of macrophage cytokine production
GO:1904706 negative regulation of vascular smooth muscle cell proliferation
GO:0043932 ossification involved in bone remodeling
GO:0030501 positive regulation of bone mineralization
GO:0051781 positive regulation of cell division
GO:0008284 positive regulation of cell population proliferation
GO:0032967 positive regulation of collagen biosynthetic process
GO:0010718 positive regulation of epithelial to mesenchymal transition
GO:0050714 positive regulation of protein secretion
GO:0051496 positive regulation of stress fiber assembly
GO:1905075 positive regulation of tight junction disassembly
GO:0045893 positive regulation of transcription, DNA-templated
GO:0032570 response to progesterone
GO:0007435 salivary gland morphogenesis
GO:0007179 transforming growth factor beta receptor signaling pathway

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1015 Disulfide bond
KW-0339 Growth factor
KW-0472 Membrane
KW-0497 Mitogen
KW-1185 Reference proteome
KW-0964 Secreted
KW-0812 Transmembrane
KW-1133 Transmembrane helix

Interpro

InterPro ID InterPro Term
IPR029034 Cystine-knot_cytokine
IPR001839 TGF-b_C
IPR001111 TGF-b_propeptide
IPR016319 TGF-beta
IPR015615 TGF-beta-rel
IPR015618 TGFB3
IPR017948 TGFb_CS

PROSITE

PROSITE ID PROSITE Term
PS00250 TGF_BETA_1
PS51362 TGF_BETA_2

Pfam

Pfam ID Pfam Term
PF00019 TGF_beta
PF00688 TGFb_propeptide