Gene: tgfb3

Basic information

Tag Content
Uniprot ID Q66I23
Entrez ID 369195
Genbank protein ID AAH81579.1; AAU14139.1; AAW66727.1;
Genbank nucleotide ID NM_194386.2
Ensembl protein ID ENSDARP00000025519
Ensembl nucleotide ID ENSDARG00000019367
Gene name Transforming growth factor beta
Gene symbol tgfb3
Organism Danio rerio
NCBI taxa ID 7955
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Transforming growth factor beta-3 proprotein: Precursor of the Latency-associated peptide (LAP) and Transforming growth factor beta-3 (TGF-beta-3) chains, which constitute the regulatory and active subunit of TGF-beta-3, respectively.
Sequence
MHLGKGLLFV LLLNSVTMSL SLSTCTTVDI DNIKKKRVEA IRGQILSKLR LTSPPQTLGP 60
SQVPYQVLAL YNSTRDLLDG FGKDRHQSCG QDNTETEYYA KEIHKFNMIQ GSPENNDLPY 120
CPKGITSKVF RFDVSIMEKN ASNLFRAEFR ALRMPNLSTS RTEQRIELYQ ILRPDEHIGK 180
QRYIGRKNVM IGGTDEWVSF DVTETVREWL TNRATNLGLE ISVHCPCHTF RPNGEIIENV 240
NEALEVKFRG MDVEDDGPIR SDMGRLKKPK EQNLPHLILM MLPPHRLDVL PTSRRRKRAL 300
DTKYCFSNYE ENCCVRKLYI DFRQDLGWRW IHEPKGYHAN FCSGPCPYLR SADTTHSSLL 360
SLYNTLNPEA SASPCCVPQD LEPLTILYYV GRTPKVEQLS NMIVKSCKCS

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologTGFB3538957A6QP91Bos taurusPredictionMore>>
1:1 orthologTGFB3490796F1PR85Canis lupus familiarisPredictionMore>>
1:1 orthologTGFB3102189962A0A452DMZ7Capra hircusPredictionMore>>
1:1 orthologTGFB37043P10600CPO,CL/PHomo sapiensPublicationMore>>
1:1 orthologTgfb3P17125CPOE11.5, E12.5, E14.0, E13.5, E14.5, E15.5Mus musculusPublicationMore>>
1:1 orthologTGFB3453054H2Q8N5Pan troglodytesPredictionMore>>
1:1 orthologTGFB3397400K7GSJ9Sus scrofaPredictionMore>>
1:1 orthologTgfb325717Q07258Rattus norvegicusPredictionMore>>
1:1 orthologtgfb3369195Q66I23Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005615 extracellular space
GO:0005125 cytokine activity
GO:0008083 growth factor activity
GO:0005114 type II transforming growth factor beta receptor binding
GO:0034714 type III transforming growth factor beta receptor binding
GO:0030509 BMP signaling pathway
GO:0060218 hematopoietic stem cell differentiation
GO:0051781 positive regulation of cell division
GO:0010862 positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0061035 regulation of cartilage development
GO:0042127 regulation of cell population proliferation
GO:0030278 regulation of ossification
GO:0060395 SMAD protein signal transduction
GO:0007179 transforming growth factor beta receptor signaling pathway

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1015 Disulfide bond
KW-0272 Extracellular matrix
KW-0339 Growth factor
KW-0497 Mitogen
KW-1185 Reference proteome
KW-0964 Secreted
KW-0732 Signal

Interpro

InterPro ID InterPro Term
IPR029034 Cystine-knot_cytokine
IPR001839 TGF-b_C
IPR001111 TGF-b_propeptide
IPR016319 TGF-beta
IPR015615 TGF-beta-rel
IPR015618 TGFB3
IPR017948 TGFb_CS

PROSITE

PROSITE ID PROSITE Term
PS00250 TGF_BETA_1
PS51362 TGF_BETA_2

Pfam

Pfam ID Pfam Term
PF00019 TGF_beta
PF00688 TGFb_propeptide