Gene: PRICKLE1

Basic information

Tag Content
Uniprot ID A0A452ECU1
Entrez ID 102182103
Genbank protein ID
Genbank nucleotide ID XM_005680143.3; XM_018047905.1; XM_018047909.1; XM_018047907.1; XM_018047908.1; XM_018047906.1;
Ensembl protein ID ENSCHIP00000009804; ENSCHIP00000009829; ENSCHIP00000009817; ENSCHIP00000009812; ENSCHIP00000009842;
Ensembl nucleotide ID ENSCHIG00000012537
Gene name Uncharacterized protein
Gene symbol PRICKLE1
Organism Capra hircus
NCBI taxa ID 9925
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MMPLEMEPKM SKLAFGCQRS STSDDDSGCA LEEYAWVPPG LRPEQIQLYF ACLPEEKVPY 60
VNSPGEKHRI KQLLYQLPPH DNEVRYCQTL SEEEKKELQV FSAQRKKEAL GRGTIKLLSR 120
AVMHAVCEQC GLKINGGEIA VFASRAGPGV CWHPSCFVCF TCSELLVDLI YFYQDGKIHC 180
GRHHAELLKP RCSACDEIIF ADECTEAEGR HWHMKHFCCL ECETVLGGQR YIMKDGRPFC 240
CGCFESLYAE YCEACGEHIG VDHAQMTYDG QHWHATEACF SCAQCKTSLL GCPFLPKQGQ 300
IYCSKTCSLG EDVHASDSSD SAFQSARSRD SRRSVRMGKS SRSADQCRQS LLLSPALNYK 360
FPGLSGNADD TLSRKLDDLS LSRQGAGFVN EEFWKGRVEH ETPEDPEEWA EHEDYMTQLL 420
LKFGDKSLFQ QQPSEMDIRA SEHWIADNMV KNKTELKQNS QSLASKKYQS DMYWAQSQDG 480
LGDSAYGSHP GPASSRRLQE LDLDHGASGY NHDQTQWYGD SLECLSDLKP EQSVRDSMDS 540
LALSNITGAS VDGESKPRPS LYSLQNFEEI ETEDCEKMSN MGTLNSSMLH RSTESLKSLS 600
SELCPEKVLP EEKSVHLPVL RRSKSQSRPQ QVKFSDDVID NGSYENIEIR QPPMSERTRR 660
RVYHFEERGP RSHHHRRRRS RKSRSDNALN LVTERKYSPK DRLRLYTPDN YEKFIQNKSA 720
REIQAYIQNA DLYGQYTHAT SDYALQNPGG PRFLGLYGED DDSWCSSSTS SSSDSEEEGY 780
FLGQPIPQPR PQRYAYYTDD LSSPTSALPT PQFGQRTTKS KKKKGHKGKN CIIS 834

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologPRICKLE1102182103A0A452ECU1Capra hircusPredictionMore>>
1:1 orthologPRICKLE1100050052F6Z985Equus caballusPredictionMore>>
1:1 orthologPRICKLE1144165Q96MT3Homo sapiensPredictionMore>>
1:1 orthologPrickle1106042Q3U5C7CPOMus musculusPublicationMore>>
1:1 orthologPRICKLE1451838A0A2I3TH70Pan troglodytesPredictionMore>>
1:1 orthologPRICKLE1G1TZ88Oryctolagus cuniculusPredictionMore>>
1:1 orthologPrickle1315259G3V8Z4Rattus norvegicusPredictionMore>>
1:1 orthologprickle1a368249F1Q6J9Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005829 cytosol
GO:0031965 nuclear membrane
GO:0008270 zinc ion binding
GO:0035904 aorta development
GO:0060976 coronary vasculature development
GO:0090090 negative regulation of canonical Wnt signaling pathway
GO:2000691 negative regulation of cardiac muscle cell myoblast differentiation
GO:0045892 negative regulation of transcription, DNA-templated
GO:0001843 neural tube closure
GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0031398 positive regulation of protein ubiquitination
GO:0006606 protein import into nucleus

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0440 LIM domain
KW-0479 Metal-binding
KW-1185 Reference proteome
KW-0677 Repeat
KW-0862 Zinc

Interpro

InterPro ID InterPro Term
IPR033726 LIM2_prickle
IPR033727 LIM3_prickle
IPR010442 PET_domain
IPR033723 PET_prickle
IPR001781 Znf_LIM

PROSITE

PROSITE ID PROSITE Term
PS00478 LIM_DOMAIN_1
PS50023 LIM_DOMAIN_2
PS51303 PET

Pfam

Pfam ID Pfam Term
PF00412 LIM
PF06297 PET