Gene: Fgfr2

Basic information

Tag Content
Uniprot ID P21803; O55141; Q00389; Q61342;
Entrez ID 14183
Genbank protein ID AAA37286.1; CAA76099.1; AAA37285.1; CAA76098.1; CAA39083.1; AAA39377.1;
Genbank nucleotide ID NM_010207.2; NM_201601.2;
Ensembl protein ID
Ensembl nucleotide ID
Gene name Fibroblast growth factor receptor 2
Gene symbol Fgfr2
Organism Mus musculus
NCBI taxa ID 10090
Cleft type CPO
Developmental stage E13.5, E14.0, E14.5, E16.0, E16.5
Data sources Manually collected
Reference 26250517; 20133659; 15316116; 20175913; 15975938; 15199404; 19235875;
Functional description Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of cell proliferation, differentiation, migration and apoptosis, and in the regulation of embryonic development. Required for normal embryonic patterning, trophoblast function, limb bud development, lung morphogenesis, osteogenesis and skin development. Plays an essential role in the regulation of osteoblast differentiation, proliferation and apoptosis, and is required for normal skeleton development. Promotes cell proliferation in keratinocytes and immature osteoblasts, but promotes apoptosis in differentiated osteoblasts. Phosphorylates PLCG1, FRS2 and PAK4. Ligand binding leads to the activation of several signaling cascades. Activation of PLCG1 leads to the production of the cellular signaling molecules diacylglycerol and inositol 1,4,5-trisphosphate. Phosphorylation of FRS2 triggers recruitment of GRB2, GAB1, PIK3R1 and SOS1, and mediates activation of RAS, MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling pathway, as well as of the AKT1 signaling pathway. FGFR2 signaling is down-regulated by ubiquitination, internalization and degradation. Mutations that lead to constitutive kinase activation or impair normal FGFR2 maturation, internalization and degradation lead to aberrant signaling. Over-expressed FGFR2 promotes activation of STAT1.
Sequence
MVSWGRFICL VLVTMATLSL ARPSFSLVED TTLEPEEPPT KYQISQPEAY VVAPGESLEL 60
QCMLKDAAVI SWTKDGVHLG PNNRTVLIGE YLQIKGATPR DSGLYACTAA RTVDSETWIF 120
MVNVTDAISS GDDEDDTDSS EDVVSENRSN QRAPYWTNTE KMEKRLHACP AANTVKFRCP 180
AGGNPTSTMR WLKNGKEFKQ EHRIGGYKVR NQHWSLIMES VVPSDKGNYT CLVENEYGSI 240
NHTYHLDVVE RSPHRPILQA GLPANASTVV GGDVEFVCKV YSDAQPHIQW IKHVEKNGSK 300
NGPDGLPYLK VLKAAGVNTT DKEIEVLYIR NVTFEDAGEY TCLAGNSIGI SFHSAWLTVL 360
PAPVREKEIT ASPDYLEIAI YCIGVFLIAC MVVTVIFCRM KTTTKKPDFS SQPAVHKLTK 420
RIPLRRQVTV SAESSSSMNS NTPLVRITTR LSSTADTPML AGVSEYELPE DPKWEFPRDK 480
LTLGKPLGEG CFGQVVMAEA VGIDKDKPKE AVTVAVKMLK DDATEKDLSD LVSEMEMMKM 540
IGKHKNIINL LGACTQDGPL YVIVEYASKG NLREYLRARR PPGMEYSYDI NRVPEEQMTF 600
KDLVSCTYQL ARGMEYLASQ KCIHRDLAAR NVLVTENNVM KIADFGLARD INNIDYYKKT 660
TNGRLPVKWM APEALFDRVY THQSDVWSFG VLMWEIFTLG GSPYPGIPVE ELFKLLKEGH 720
RMDKPTNCTN ELYMMMRDCW HAVPSQRPTF KQLVEDLDRI LTLTTNEEYL DLTQPLEQYS 780
PSYPDTSSSC SSGDDSVFSP DPMPYEPCLP QYPHINGSVK T 821

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Gene expression information

Gene expression during embryonic days (E11.5~E18.5) ~ adult days (Ps) in the lip and palate tissues. (X-axis: days, Y-axis: tissues)

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Protein structural annotations

3D structure in PDB database


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Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologFGFR2102170938A0A452F370Capra hircusPredictionMore>>
1:1 orthologFGFR22263P21802Homo sapiensPublicationMore>>
1:1 orthologFgfr214183P21803CPOE13.5, E14.0, E14.5, E16.0, E16.5Mus musculusPublicationMore>>
1:1 orthologFGFR2A0A2I3S3S0Pan troglodytesPredictionMore>>
1:1 orthologA0A480U9V2Sus scrofaPredictionMore>>
1:1 orthologFGFR2100009417G1SSB0Oryctolagus cuniculusPredictionMore>>
1:1 orthologFgfr225022F1LSG7Rattus norvegicusPredictionMore>>
1:1 orthologfgfr2A4JYI8Danio rerioPredictionMore>>

Identified variants/mutations related to cleft phenotype

Gene symbol Significant Variants/SNPS Methods PubMed ID
FGFR2g.123099960G>AGWAS and Sanger sequencing25704602
FGFR2c.212T>C; p.M71TWES and Sanger sequencing26449438

Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0004714 transmembrane receptor protein tyrosine kinase activityIBA
GO:0005007 fibroblast growth factor-activated receptor activityISO
GO:0005007 fibroblast growth factor-activated receptor activityIBA
GO:0005515 protein bindingIPI
GO:0005524 ATP bindingIEA
GO:0008201 heparin bindingIEA
GO:0017134 fibroblast growth factor bindingISO
GO:0017134 fibroblast growth factor bindingIBA
GO:0017134 fibroblast growth factor bindingIDA
GO:0042802 identical protein bindingISO
GO:0042803 protein homodimerization activityISO

GO:Biological Process

GO ID GO Term Evidence
GO:0000122 negative regulation of transcription by RNA polymerase IIIMP
GO:0001525 angiogenesisIGI
GO:0001657 ureteric bud developmentIGI
GO:0001701 in utero embryonic developmentIGI
GO:0001701 in utero embryonic developmentIMP
GO:0001837 epithelial to mesenchymal transitionISO
GO:0002053 positive regulation of mesenchymal cell proliferationIGI
GO:0003148 outflow tract septum morphogenesisIMP
GO:0003149 membranous septum morphogenesisIMP
GO:0006915 apoptotic processIEA
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathwayIBA
GO:0007267 cell-cell signalingIMP
GO:0007275 multicellular organism developmentIBA
GO:0007409 axonogenesisIMP
GO:0007528 neuromuscular junction developmentIMP
GO:0008284 positive regulation of cell population proliferationISO
GO:0008284 positive regulation of cell population proliferationIMP
GO:0008284 positive regulation of cell population proliferationIGI
GO:0008285 negative regulation of cell population proliferationIGI
GO:0008543 fibroblast growth factor receptor signaling pathwayISO
GO:0008543 fibroblast growth factor receptor signaling pathwayIGI
GO:0008543 fibroblast growth factor receptor signaling pathwayIMP
GO:0008589 regulation of smoothened signaling pathwayIMP
GO:0009791 post-embryonic developmentIMP
GO:0009880 embryonic pattern specificationIMP
GO:0009887 animal organ morphogenesisIMP
GO:0010518 positive regulation of phospholipase activityISO
GO:0010628 positive regulation of gene expressionIMP
GO:0016331 morphogenesis of embryonic epitheliumIMP
GO:0018108 peptidyl-tyrosine phosphorylationISO
GO:0021769 orbitofrontal cortex developmentIMP
GO:0021847 ventricular zone neuroblast divisionIMP
GO:0021860 pyramidal neuron developmentIMP
GO:0022612 gland morphogenesisIMP
GO:0030177 positive regulation of Wnt signaling pathwayIMP
GO:0030282 bone mineralizationIMP
GO:0030324 lung developmentIMP
GO:0030324 lung developmentIGI
GO:0030855 epithelial cell differentiationIMP
GO:0030901 midbrain developmentIGI
GO:0030916 otic vesicle formationTAS
GO:0030916 otic vesicle formationIMP
GO:0031069 hair follicle morphogenesisIMP
GO:0032808 lacrimal gland developmentIMP
GO:0033674 positive regulation of kinase activityIBA
GO:0035265 organ growthIMP
GO:0035602 fibroblast growth factor receptor signaling pathway involved in negative regulation of apoptotic process in bone marrow cellIMP
GO:0035603 fibroblast growth factor receptor signaling pathway involved in hemopoiesisIMP
GO:0035604 fibroblast growth factor receptor signaling pathway involved in positive regulation of cell proliferation in bone marrowIMP
GO:0035607 fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex developmentIMP
GO:0042127 regulation of cell population proliferationIMP
GO:0042472 inner ear morphogenesisIMP
GO:0042476 odontogenesisIMP
GO:0043410 positive regulation of MAPK cascadeISO
GO:0045165 cell fate commitmentIDA
GO:0045165 cell fate commitmentIMP
GO:0045787 positive regulation of cell cycleIMP
GO:0045839 negative regulation of mitotic nuclear divisionIGI
GO:0045944 positive regulation of transcription by RNA polymerase IIIMP
GO:0046777 protein autophosphorylationISO
GO:0048286 lung alveolus developmentIGI
GO:0048286 lung alveolus developmentIMP
GO:0048489 synaptic vesicle transportIMP
GO:0048557 embryonic digestive tract morphogenesisIMP
GO:0048562 embryonic organ morphogenesisIMP
GO:0048565 digestive tract developmentIMP
GO:0048568 embryonic organ developmentIMP
GO:0048608 reproductive structure developmentIMP
GO:0048661 positive regulation of smooth muscle cell proliferationISO
GO:0048701 embryonic cranial skeleton morphogenesisISO
GO:0048730 epidermis morphogenesisIMP
GO:0048755 branching morphogenesis of a nerveIMP
GO:0048762 mesenchymal cell differentiationIGI
GO:0050678 regulation of epithelial cell proliferationIMP
GO:0050679 positive regulation of epithelial cell proliferationIMP
GO:0050679 positive regulation of epithelial cell proliferationIGI
GO:0050680 negative regulation of epithelial cell proliferationISO
GO:0051150 regulation of smooth muscle cell differentiationIMP
GO:0051781 positive regulation of cell divisionIMP
GO:0055010 ventricular cardiac muscle tissue morphogenesisIMP
GO:0060045 positive regulation of cardiac muscle cell proliferationIGI
GO:0060174 limb bud formationIMP
GO:0060348 bone developmentIMP
GO:0060349 bone morphogenesisIMP
GO:0060365 coronal suture morphogenesisIMP
GO:0060441 epithelial tube branching involved in lung morphogenesisIMP
GO:0060442 branching involved in prostate gland morphogenesisIMP
GO:0060445 branching involved in salivary gland morphogenesisIMP
GO:0060449 bud elongation involved in lung branchingIMP
GO:0060463 lung lobe morphogenesisIMP
GO:0060484 lung-associated mesenchyme developmentIMP
GO:0060484 lung-associated mesenchyme developmentIGI
GO:0060501 positive regulation of epithelial cell proliferation involved in lung morphogenesisIMP
GO:0060512 prostate gland morphogenesisIMP
GO:0060523 prostate epithelial cord elongationIMP
GO:0060527 prostate epithelial cord arborization involved in prostate glandular acinus morphogenesisIMP
GO:0060529 squamous basal epithelial stem cell differentiation involved in prostate gland acinus developmentIMP
GO:0060595 fibroblast growth factor receptor signaling pathway involved in mammary gland specificationIMP
GO:0060601 lateral sprouting from an epitheliumIMP
GO:0060615 mammary gland bud formationIMP
GO:0060664 epithelial cell proliferation involved in salivary gland morphogenesisIGI
GO:0060664 epithelial cell proliferation involved in salivary gland morphogenesisIMP
GO:0060667 branch elongation involved in salivary gland morphogenesisIGI
GO:0060667 branch elongation involved in salivary gland morphogenesisIMP
GO:0060670 branching involved in labyrinthine layer morphogenesisIMP
GO:0060688 regulation of morphogenesis of a branching structureIMP
GO:0060915 mesenchymal cell differentiation involved in lung developmentIGI
GO:0060916 mesenchymal cell proliferation involved in lung developmentIMP
GO:0060979 vasculogenesis involved in coronary vascular morphogenesisTAS
GO:0061031 endodermal digestive tract morphogenesisIMP
GO:0070307 lens fiber cell developmentIGI
GO:0070307 lens fiber cell developmentIMP
GO:0070372 regulation of ERK1 and ERK2 cascadeIMP
GO:0070374 positive regulation of ERK1 and ERK2 cascadeIGI
GO:0090263 positive regulation of canonical Wnt signaling pathwayIMP
GO:0090263 positive regulation of canonical Wnt signaling pathwayIGI

GO:Cellular Component

GO ID GO Term Evidence
GO:0005576 extracellular regionTAS
GO:0005623 cellIEA
GO:0005634 nucleusISO
GO:0005634 nucleusIDA
GO:0005737 cytoplasmISO
GO:0005794 Golgi apparatusIEA
GO:0005887 integral component of plasma membraneISO
GO:0005887 integral component of plasma membraneIBA
GO:0005938 cell cortexISO
GO:0009986 cell surfaceISO
GO:0031410 cytoplasmic vesicleIEA
GO:0043235 receptor complexIBA
GO:0060076 excitatory synapseIMP
GO:0062023 collagen-containing extracellular matrixISO

Reactome Pathway

Reactome ID Reactome Term Evidence
R-MMU-109704 PI3K CascadeIEA
R-MMU-112399 IRS-mediated signallingIEA
R-MMU-1257604 PIP3 activates AKT signalingIEA
R-MMU-1280215 Cytokine Signaling in Immune systemIEA
R-MMU-162582 Signal TransductionIEA
R-MMU-168256 Immune SystemIEA
R-MMU-190236 Signaling by FGFRIEA
R-MMU-190241 FGFR2 ligand binding and activationIEA
R-MMU-190375 FGFR2c ligand binding and activationIEA
R-MMU-190377 FGFR2b ligand binding and activationIEA
R-MMU-199418 Negative regulation of the PI3K/AKT networkIEA
R-MMU-2404192 Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)IEA
R-MMU-2428924 IGF1R signaling cascadeIEA
R-MMU-2428928 IRS-related events triggered by IGF1RIEA
R-MMU-5654221 Phospholipase C-mediated cascade; FGFR2IEA
R-MMU-5654695 PI-3K cascade:FGFR2IEA
R-MMU-5654696 Downstream signaling of activated FGFR2IEA
R-MMU-5654699 SHC-mediated cascade:FGFR2IEA
R-MMU-5654700 FRS-mediated FGFR2 signalingIEA
R-MMU-5654727 Negative regulation of FGFR2 signalingIEA
R-MMU-5654738 Signaling by FGFR2IEA
R-MMU-5673001 RAF/MAP kinase cascadeIEA
R-MMU-5683057 MAPK family signaling cascadesIEA
R-MMU-5684996 MAPK1/MAPK3 signalingIEA
R-MMU-6811558 PI5P, PP2A and IER3 Regulate PI3K/AKT SignalingIEA
R-MMU-74751 Insulin receptor signalling cascadeIEA
R-MMU-74752 Signaling by Insulin receptorIEA
R-MMU-9006925 Intracellular signaling by second messengersIEA
R-MMU-9006934 Signaling by Receptor Tyrosine KinasesIEA
R-MMU-9607240 FLT3 SignalingIEA

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0002 3D-structure
KW-0025 Alternative splicing
KW-0053 Apoptosis
KW-0067 ATP-binding
KW-1003 Cell membrane
KW-0968 Cytoplasmic vesicle
KW-1015 Disulfide bond
KW-0325 Glycoprotein
KW-0333 Golgi apparatus
KW-0358 Heparin-binding
KW-0393 Immunoglobulin domain
KW-0418 Kinase
KW-0472 Membrane
KW-0547 Nucleotide-binding
KW-0597 Phosphoprotein
KW-0656 Proto-oncogene
KW-0675 Receptor
KW-1185 Reference proteome
KW-0677 Repeat
KW-0732 Signal
KW-0808 Transferase
KW-0812 Transmembrane
KW-1133 Transmembrane helix
KW-0829 Tyrosine-protein kinase
KW-0832 Ubl conjugation

Interpro

InterPro ID InterPro Term
IPR016248 FGF_rcpt_fam
IPR041159 FGFR_TM
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR013098 Ig_I-set
IPR003599 Ig_sub
IPR003598 Ig_sub2
IPR011009 Kinase-like_dom_sf
IPR000719 Prot_kinase_dom
IPR017441 Protein_kinase_ATP_BS
IPR001245 Ser-Thr/Tyr_kinase_cat_dom
IPR008266 Tyr_kinase_AS
IPR020635 Tyr_kinase_cat_dom

PROSITE

PROSITE ID PROSITE Term
PS50835 IG_LIKE
PS00107 PROTEIN_KINASE_ATP
PS50011 PROTEIN_KINASE_DOM
PS00109 PROTEIN_KINASE_TYR

Pfam

Pfam ID Pfam Term
PF18123 FGFR3_TM
PF07679 I-set
PF07714 Pkinase_Tyr

Protein-protein interaction

Protein-miRNA interaction