Gene: Myh9

Basic information

Tag Content
Uniprot ID Q8VDD5; Q3UHT9; Q3UHU4; Q6KAN6; Q811I2;
Entrez ID 17886
Genbank protein ID CAC85955.1; BAE27777.1; BAE27768.1; BAE27767.1; BAE27894.1; BAE27783.1; BAE27829.1; BAE27773.1; BAE27778.1; BAE27776.1; BAE27766.1; AAH44834.1; BAE27785.1; BAE27765.1; BAE27906.1; BAE27772.1; BAD21421.1; BAE27763.1; BAE27761.1;
Genbank nucleotide ID NM_022410.3
Ensembl protein ID ENSMUSP00000016771
Ensembl nucleotide ID ENSMUSG00000022443
Gene name Myosin-9
Gene symbol Myh9
Organism Mus musculus
NCBI taxa ID 10090
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description During cell spreading, plays an important role in cytoskeleton reorganization, focal contacts formation (in the margins but not the central part of spreading cells), and lamellipodial retraction; this function is mechanically antagonized by MYH10 (By similarity). Cellular myosin that appears to play a role in cytokinesis, cell shape, and specialized functions such as secretion and capping.
Sequence
MAQQAADKYL YVDKNFINNP LAQADWAAKK LVWVPSSKNG FEPASLKEEV GEEAIVELVE 60
NGKKVKVNKD DIQKMNPPKF SKVEDMAELT CLNEASVLHN LKERYYSGLI YTYSGLFCVV 120
INPYKNLPIY SEEIVEMYKG KKRHEMPPHI YAITDTAYRS MMQDREDQSI LCTGESGAGK 180
TENTKKVIQY LAHVASSHKS KKDQGELERQ LLQANPILEA FGNAKTVKND NSSRFGKFIR 240
INFDVNGYIV GANIETYLLE KSRAIRQAKE ERTFHIFYYL LSGAGEHLKT DLLLEPYNKY 300
RFLSNGHVTI PGQQDKDMFQ ETMEAMRIMG IPEDEQMGLL RVISGVLQLG NIAFKKERNT 360
DQASMPDNTA AQKVSHLLGI NVTDFTRGIL TPRIKVGRDY VQKAQTKEQA DFAIEALAKA 420
TYERMFRWLV LRINKALDKT KRQGASFIGI LDIAGFEIFD LNSFEQLCIN YTNEKLQQLF 480
NHTMFILEQE EYQREGIEWN FIDFGLDLQP CIDLIEKPAG PPGILALLDE ECWFPKATDK 540
SFVEKVVQEQ GTHPKFQKPK QLKDKADFCI IHYAGKVDYK ADEWLMKNMD PLNDNIATLL 600
HQSSDKFVSE LWKDVDRIIG LDQVAGMSET ALPGAFKTRK GMFRTVGQLY KEQLAKLMAT 660
LRNTNPNFVR CIIPNHEKKA GKLDPHLVLD QLRCNGVLEG IRICRQGFPN RVVFQEFRQR 720
YEILTPNSIP KGFMDGKQAC VLMIKALELD SNLYRIGQSK VFFRAGVLAH LEEERDLKIT 780
DVIIGFQACC RGYLARKAFA KRQQQLTAMK VLQRNCAAYL RLRNWQWWRL FTKVKPLLNS 840
IRHEDELLAK EAELTKVREK HLAAENRLTE METMQSQLMA EKLQLQEQLQ AETELCAEAE 900
ELRARLTAKK QELEEICHDL EARVEEEEER CQYLQAEKKK MQQNIQELEE QLEEEESARQ 960
KLQLEKVTTE AKLKKLEEDQ IIMEDQNCKL AKEKKLLEDR VAEFTTNLME EEEKSKSLAK 1020
LKNKHEAMIT DLEERLRREE KQRQELEKTR RKLEGDSTDL SDQIAELQAQ IAELKMQLAK 1080
KEEELQAALA RVEEEAAQKN MALKKIRELE TQISELQEDL ESERASRNKA EKQKRDLGEE 1140
LEALKTELED TLDSTAAQQE LRSKREQEVS ILKKTLEDEA KTHEAQIQEM RQKHSQAVEE 1200
LADQLEQTKR VKATLEKAKQ TLENERGELA NEVKALLQGK GDSEHKRKKV EAQLQELQVK 1260
FSEGERVRTE LADKVTKLQV ELDSVTGLLS QSDSKSSKLT KDFSALESQL QDTQELLQEE 1320
NRQKLSLSTK LKQMEDEKNS FREQLEEEEE AKRNLEKQIA TLHAQVTDMK KKMEDGVGCL 1380
ETAEEAKRRL QKDLEGLSQR LEEKVAAYDK LEKTKTRLQQ ELDDLLVDLD HQRQSVSNLE 1440
KKQKKFDQLL AEEKTISAKY AEERDRAEAE AREKETKALS LARALEEAME QKAELERLNK 1500
QFRTEMEDLM SSKDDVGKSV HELEKSKRAL EQQVEEMKTQ LEELEDELQA TEDAKLRLEV 1560
NLQAMKAQFE RDLQGRDEQS EEKKKQLVRQ VREMEAELED ERKQRSMAMA ARKKLEMDLK 1620
DLEAHIDTAN KNREEAIKQL RKLQAQMKDC MRELDDTRAS REEILAQAKE NEKKLKSMEA 1680
EMIQLQEELA AAERAKRQAQ QERDELADEI ANSSGKGALA LEEKRRLEAR IAQLEEELEE 1740
EQGNTELIND RLKKANLQID QINTDLNLER SHAQKNENAR QQLERQNKEL KAKLQEMESA 1800
VKSKYKASIA ALEAKIAQLE EQLDNETKER QAASKQVRRT EKKLKDVLLQ VEDERRNAEQ 1860
FKDQADKAST RLKQLKRQLE EAEEEAQRAN ASRRKLQREL EDATETADAM NREVSSLKNK 1920
LRRGDLPFVV TRRIVRKGTG DCSDEEVDGK ADGADAKAAE

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein structural annotations

3D structure in PDB database

There is no related protein structure for this gene.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologMYH9F1P9J3Canis lupus familiarisPredictionMore>>
1:1 orthologMYH9A0A452FAS7Capra hircusPredictionMore>>
1:1 orthologMYH94627P35579CPO,CL/PHomo sapiensPublicationMore>>
1:1 orthologMyh917886Q8VDD5Mus musculusPredictionMore>>
1:1 orthologMYH9A0A2I3T2I7Pan troglodytesPredictionMore>>
1:1 orthologMyh925745G3V6P7Rattus norvegicusPredictionMore>>
1:1 orthologmyh9bF1QJK4Danio rerioPredictionMore>>

Identified variants/mutations related to cleft phenotype

Gene symbol Significant Variants/SNPS Methods PubMed ID
MYH9rs2269529T>CTDT19891592
MYH9rs16996652A>TTDT19891592
MYH9rs7078PCR; TDT19320731
MYH9rs1002246Linkage analysis18716610
MYH9rs2269529T>C; c.4876A>G; p.I1626VWES and Sanger sequencing26449438

Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0000146 microfilament motor activityISO
GO:0000146 microfilament motor activityISS
GO:0003779 actin bindingISO
GO:0005178 integrin bindingISS
GO:0005178 integrin bindingISO
GO:0005515 protein bindingIPI
GO:0005516 calmodulin bindingIEA
GO:0005524 ATP bindingISO
GO:0016887 ATPase activityISS
GO:0016887 ATPase activityISO
GO:0019904 protein domain specific bindingISO
GO:0019904 protein domain specific bindingIPI
GO:0030898 actin-dependent ATPase activityISO
GO:0042803 protein homodimerization activityISS
GO:0042803 protein homodimerization activityISO
GO:0043495 protein membrane adaptorISS
GO:0043495 protein membrane adaptorISO
GO:0043531 ADP bindingISO
GO:0051015 actin filament bindingISO
GO:0051015 actin filament bindingISS

GO:Biological Process

GO ID GO Term Evidence
GO:0000212 meiotic spindle organizationIDA
GO:0000904 cell morphogenesis involved in differentiationIMP
GO:0001525 angiogenesisISS
GO:0001525 angiogenesisISO
GO:0001701 in utero embryonic developmentIMP
GO:0001768 establishment of T cell polarityIMP
GO:0001778 plasma membrane repairISO
GO:0006509 membrane protein ectodomain proteolysisISS
GO:0006509 membrane protein ectodomain proteolysisISO
GO:0006911 phagocytosis, engulfmentIMP
GO:0007155 cell adhesionIMP
GO:0007520 myoblast fusionIMP
GO:0008360 regulation of cell shapeISS
GO:0008360 regulation of cell shapeISO
GO:0008360 regulation of cell shapeIMP
GO:0015031 protein transportISS
GO:0015031 protein transportISO
GO:0030048 actin filament-based movementISO
GO:0030048 actin filament-based movementISS
GO:0030220 platelet formationISS
GO:0030220 platelet formationISO
GO:0030224 monocyte differentiationISS
GO:0031032 actomyosin structure organizationISO
GO:0031532 actin cytoskeleton reorganizationISS
GO:0031532 actin cytoskeleton reorganizationISO
GO:0032418 lysosome localizationISO
GO:0032506 cytokinetic processISS
GO:0032506 cytokinetic processISO
GO:0032796 uropod organizationIMP
GO:0043534 blood vessel endothelial cell migrationISS
GO:0043534 blood vessel endothelial cell migrationISO
GO:0045055 regulated exocytosisISO
GO:0051295 establishment of meiotic spindle localizationIDA
GO:0098609 cell-cell adhesionIMP
GO:1903919 negative regulation of actin filament severingISO
GO:1903919 negative regulation of actin filament severingIMP
GO:1903923 positive regulation of protein processing in phagocytic vesicleIMP
GO:1905684 regulation of plasma membrane repairISO
GO:0030041 actin filament polymerizationIDA
GO:0051693 actin filament cappingIDA

GO:Cellular Component

GO ID GO Term Evidence
GO:0001725 stress fiberISO
GO:0001725 stress fiberISS
GO:0001725 stress fiberIDA
GO:0001726 ruffleISS
GO:0001726 ruffleISO
GO:0001931 uropodISO
GO:0001931 uropodIDA
GO:0005623 cellIEA
GO:0005634 nucleusISS
GO:0005634 nucleusISO
GO:0005737 cytoplasmISS
GO:0005737 cytoplasmISO
GO:0005737 cytoplasmIDA
GO:0005826 actomyosin contractile ringISS
GO:0005826 actomyosin contractile ringISO
GO:0005829 cytosolISS
GO:0005829 cytosolISO
GO:0005886 plasma membraneISS
GO:0005903 brush borderIDA
GO:0005912 adherens junctionIDA
GO:0005938 cell cortexIDA
GO:0015629 actin cytoskeletonISS
GO:0015629 actin cytoskeletonISO
GO:0016459 myosin complexIDA
GO:0016460 myosin II complexISO
GO:0016460 myosin II complexIDA
GO:0030863 cortical cytoskeletonIDA
GO:0031252 cell leading edgeISS
GO:0031252 cell leading edgeISO
GO:0032154 cleavage furrowISS
GO:0032154 cleavage furrowISO
GO:0032991 protein-containing complexISS
GO:0032991 protein-containing complexISO
GO:0042641 actomyosinISO
GO:0097513 myosin II filamentISO
GO:0001772 immunological synapseISO
GO:0001772 immunological synapseIDA
GO:0005819 spindleIDA
GO:0005886 plasma membraneISO
GO:0005886 plasma membraneIDA
GO:0005925 focal adhesionIDA
GO:0008180 COP9 signalosomeISO
GO:0031594 neuromuscular junctionIDA

Reactome Pathway

Reactome ID Reactome Term Evidence
R-MMU-162582 Signal TransductionIEA
R-MMU-168249 Innate Immune SystemIEA
R-MMU-168256 Immune SystemIEA
R-MMU-194315 Signaling by Rho GTPasesIEA
R-MMU-195258 RHO GTPase EffectorsIEA
R-MMU-2029480 Fcgamma receptor (FCGR) dependent phagocytosisIEA
R-MMU-2029482 Regulation of actin dynamics for phagocytic cup formationIEA
R-MMU-5627123 RHO GTPases activate PAKsIEA

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0007 Acetylation
KW-0009 Actin-binding
KW-0067 ATP-binding
KW-0112 Calmodulin-binding
KW-0130 Cell adhesion
KW-0133 Cell shape
KW-0175 Coiled coil
KW-0963 Cytoplasm
KW-0206 Cytoskeleton
KW-0903 Direct protein sequencing
KW-0488 Methylation
KW-0505 Motor protein
KW-0518 Myosin
KW-0547 Nucleotide-binding
KW-0597 Phosphoprotein
KW-1185 Reference proteome
KW-0832 Ubl conjugation

Interpro

InterPro ID InterPro Term
IPR000048 IQ_motif_EF-hand-BS
IPR036961 Kinesin_motor_dom_sf
IPR001609 Myosin_head_motor_dom
IPR027401 Myosin_IQ_contain_sf
IPR004009 Myosin_N
IPR008989 Myosin_S1_N
IPR002928 Myosin_tail
IPR027417 P-loop_NTPase

PROSITE

PROSITE ID PROSITE Term
PS50096 IQ
PS51456 MYOSIN_MOTOR
PS51844 SH3_LIKE

Pfam

Pfam ID Pfam Term
PF00063 Myosin_head
PF02736 Myosin_N
PF01576 Myosin_tail_1

Protein-protein interaction

Protein-miRNA interaction