Gene Page: VWDE
Summary ?
| GeneID | 221806 |
| Symbol | VWDE |
| Synonyms | - |
| Description | von Willebrand factor D and EGF domains |
| Reference | HGNC:HGNC:21897|Ensembl:ENSG00000146530|Vega:OTTHUMG00000152315 |
| Gene type | protein-coding |
| Map location | 7p21.3 |
| Pascal p-value | 0.068 |
| Fetal beta | -0.588 |
| eGene | Anterior cingulate cortex BA24 Caudate basal ganglia Cortex Frontal Cortex BA9 Hippocampus Hypothalamus Nucleus accumbens basal ganglia Putamen basal ganglia Meta |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:GWASdb | Genome-wide Association Studies | GWASdb records for schizophrenia | |
| CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
eQTL annotation
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs2192839 | 7 | 12326930 | VWDE | ENSG00000146530.7 | 1.396E-6 | 0 | 116637 | gtex_brain_ba24 |
| rs4721072 | 7 | 12328627 | VWDE | ENSG00000146530.7 | 1.071E-6 | 0 | 114940 | gtex_brain_ba24 |
| rs4721073 | 7 | 12328765 | VWDE | ENSG00000146530.7 | 1.071E-6 | 0 | 114802 | gtex_brain_ba24 |
| rs58475512 | 7 | 12328839 | VWDE | ENSG00000146530.7 | 1.211E-6 | 0 | 114728 | gtex_brain_ba24 |
| rs6956206 | 7 | 12328863 | VWDE | ENSG00000146530.7 | 1.071E-6 | 0 | 114704 | gtex_brain_ba24 |
| rs4721074 | 7 | 12328994 | VWDE | ENSG00000146530.7 | 1.071E-6 | 0 | 114573 | gtex_brain_ba24 |
| rs1155631 | 7 | 12329228 | VWDE | ENSG00000146530.7 | 1.071E-6 | 0 | 114339 | gtex_brain_ba24 |
| rs4236269 | 7 | 12329997 | VWDE | ENSG00000146530.7 | 1.071E-6 | 0 | 113570 | gtex_brain_ba24 |
| rs984602 | 7 | 12330000 | VWDE | ENSG00000146530.7 | 1.071E-6 | 0 | 113567 | gtex_brain_ba24 |
| rs984601 | 7 | 12330015 | VWDE | ENSG00000146530.7 | 1.071E-6 | 0 | 113552 | gtex_brain_ba24 |
| rs6962294 | 7 | 12330213 | VWDE | ENSG00000146530.7 | 1.117E-6 | 0 | 113354 | gtex_brain_ba24 |
| rs6460916 | 7 | 12330317 | VWDE | ENSG00000146530.7 | 1.071E-6 | 0 | 113250 | gtex_brain_ba24 |
| rs6460917 | 7 | 12330386 | VWDE | ENSG00000146530.7 | 1.071E-6 | 0 | 113181 | gtex_brain_ba24 |
| rs1030031 | 7 | 12337569 | VWDE | ENSG00000146530.7 | 6.573E-9 | 0 | 105998 | gtex_brain_ba24 |
| rs2356163 | 7 | 12338004 | VWDE | ENSG00000146530.7 | 6.583E-9 | 0 | 105563 | gtex_brain_ba24 |
| rs6460919 | 7 | 12338058 | VWDE | ENSG00000146530.7 | 6.583E-9 | 0 | 105509 | gtex_brain_ba24 |
| rs2098365 | 7 | 12338094 | VWDE | ENSG00000146530.7 | 6.583E-9 | 0 | 105473 | gtex_brain_ba24 |
| rs6943503 | 7 | 12338952 | VWDE | ENSG00000146530.7 | 6.578E-9 | 0 | 104615 | gtex_brain_ba24 |
| rs6964036 | 7 | 12339218 | VWDE | ENSG00000146530.7 | 5.083E-9 | 0 | 104349 | gtex_brain_ba24 |
| rs2192838 | 7 | 12340224 | VWDE | ENSG00000146530.7 | 6.305E-7 | 0 | 103343 | gtex_brain_ba24 |
| rs7806138 | 7 | 12340669 | VWDE | ENSG00000146530.7 | 4.983E-10 | 0 | 102898 | gtex_brain_ba24 |
| rs4721083 | 7 | 12343003 | VWDE | ENSG00000146530.7 | 4.848E-9 | 0 | 100564 | gtex_brain_ba24 |
| rs7790790 | 7 | 12346488 | VWDE | ENSG00000146530.7 | 1.684E-9 | 0 | 97079 | gtex_brain_ba24 |
| rs4721084 | 7 | 12352437 | VWDE | ENSG00000146530.7 | 2.663E-9 | 0 | 91130 | gtex_brain_ba24 |
| rs2110802 | 7 | 12356118 | VWDE | ENSG00000146530.7 | 1.667E-10 | 0 | 87449 | gtex_brain_ba24 |
| rs6945190 | 7 | 12357020 | VWDE | ENSG00000146530.7 | 1.667E-10 | 0 | 86547 | gtex_brain_ba24 |
| rs2356166 | 7 | 12360544 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 83023 | gtex_brain_ba24 |
| rs2024441 | 7 | 12361834 | VWDE | ENSG00000146530.7 | 1.576E-9 | 0 | 81733 | gtex_brain_ba24 |
| rs10235534 | 7 | 12364813 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 78754 | gtex_brain_ba24 |
| rs2356168 | 7 | 12364888 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 78679 | gtex_brain_ba24 |
| rs4721085 | 7 | 12367783 | VWDE | ENSG00000146530.7 | 3.411E-10 | 0 | 75784 | gtex_brain_ba24 |
| rs56913846 | 7 | 12369581 | VWDE | ENSG00000146530.7 | 3.309E-10 | 0 | 73986 | gtex_brain_ba24 |
| rs10269851 | 7 | 12369616 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 73951 | gtex_brain_ba24 |
| rs10240630 | 7 | 12369705 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 73862 | gtex_brain_ba24 |
| rs2160270 | 7 | 12369891 | VWDE | ENSG00000146530.7 | 7.485E-9 | 0 | 73676 | gtex_brain_ba24 |
| rs3832492 | 7 | 12370029 | VWDE | ENSG00000146530.7 | 2.77E-10 | 0 | 73538 | gtex_brain_ba24 |
| rs3735180 | 7 | 12370369 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 73198 | gtex_brain_ba24 |
| rs2287068 | 7 | 12370443 | VWDE | ENSG00000146530.7 | 3.718E-9 | 0 | 73124 | gtex_brain_ba24 |
| rs1059002 | 7 | 12370794 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 72773 | gtex_brain_ba24 |
| rs6954265 | 7 | 12370952 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 72615 | gtex_brain_ba24 |
| rs6954555 | 7 | 12371001 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 72566 | gtex_brain_ba24 |
| rs3815534 | 7 | 12371019 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 72548 | gtex_brain_ba24 |
| rs3815531 | 7 | 12371506 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 72061 | gtex_brain_ba24 |
| rs3815530 | 7 | 12371575 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 71992 | gtex_brain_ba24 |
| rs3815529 | 7 | 12371653 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 71914 | gtex_brain_ba24 |
| rs3815528 | 7 | 12371801 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 71766 | gtex_brain_ba24 |
| rs3815527 | 7 | 12371949 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 71618 | gtex_brain_ba24 |
| rs3815526 | 7 | 12372023 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 71544 | gtex_brain_ba24 |
| rs3815525 | 7 | 12372029 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 71538 | gtex_brain_ba24 |
| rs2356169 | 7 | 12372410 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 71157 | gtex_brain_ba24 |
| rs199835074 | 7 | 12372589 | VWDE | ENSG00000146530.7 | 3.727E-10 | 0 | 70978 | gtex_brain_ba24 |
| rs5882354 | 7 | 12372591 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 70976 | gtex_brain_ba24 |
| rs7780547 | 7 | 12372852 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 70715 | gtex_brain_ba24 |
| rs6460928 | 7 | 12372999 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 70568 | gtex_brain_ba24 |
| rs6460929 | 7 | 12373082 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 70485 | gtex_brain_ba24 |
| rs6460930 | 7 | 12373353 | VWDE | ENSG00000146530.7 | 9.84E-9 | 0 | 70214 | gtex_brain_ba24 |
| rs6460931 | 7 | 12373354 | VWDE | ENSG00000146530.7 | 3.633E-8 | 0 | 70213 | gtex_brain_ba24 |
| rs1861310 | 7 | 12373718 | VWDE | ENSG00000146530.7 | 4.227E-9 | 0 | 69849 | gtex_brain_ba24 |
| rs200877704 | 7 | 12374080 | VWDE | ENSG00000146530.7 | 1.2E-7 | 0 | 69487 | gtex_brain_ba24 |
| rs2356170 | 7 | 12374122 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 69445 | gtex_brain_ba24 |
| rs1011811 | 7 | 12374771 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 68796 | gtex_brain_ba24 |
| rs1011812 | 7 | 12375004 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 68563 | gtex_brain_ba24 |
| rs2192828 | 7 | 12376811 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 66756 | gtex_brain_ba24 |
| rs2024440 | 7 | 12377401 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 66166 | gtex_brain_ba24 |
| rs2024439 | 7 | 12377448 | VWDE | ENSG00000146530.7 | 4.227E-9 | 0 | 66119 | gtex_brain_ba24 |
| rs7796249 | 7 | 12377893 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 65674 | gtex_brain_ba24 |
| rs6460932 | 7 | 12378557 | VWDE | ENSG00000146530.7 | 3.455E-10 | 0 | 65010 | gtex_brain_ba24 |
| rs6973401 | 7 | 12379513 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 64054 | gtex_brain_ba24 |
| rs6951166 | 7 | 12382330 | VWDE | ENSG00000146530.7 | 7.059E-10 | 0 | 61237 | gtex_brain_ba24 |
| rs10229123 | 7 | 12382522 | VWDE | ENSG00000146530.7 | 3.219E-8 | 0 | 61045 | gtex_brain_ba24 |
| rs1440030 | 7 | 12382637 | VWDE | ENSG00000146530.7 | 3.349E-10 | 0 | 60930 | gtex_brain_ba24 |
| rs1440031 | 7 | 12383158 | VWDE | ENSG00000146530.7 | 3.343E-10 | 0 | 60409 | gtex_brain_ba24 |
| rs1440032 | 7 | 12383967 | VWDE | ENSG00000146530.7 | 3.343E-10 | 0 | 59600 | gtex_brain_ba24 |
| rs6972134 | 7 | 12384836 | VWDE | ENSG00000146530.7 | 3.348E-10 | 0 | 58731 | gtex_brain_ba24 |
| rs2110803 | 7 | 12385521 | VWDE | ENSG00000146530.7 | 3.357E-10 | 0 | 58046 | gtex_brain_ba24 |
| rs1440033 | 7 | 12386207 | VWDE | ENSG00000146530.7 | 9.236E-10 | 0 | 57360 | gtex_brain_ba24 |
| rs1440034 | 7 | 12386256 | VWDE | ENSG00000146530.7 | 9.236E-10 | 0 | 57311 | gtex_brain_ba24 |
| rs1440036 | 7 | 12386448 | VWDE | ENSG00000146530.7 | 1.015E-8 | 0 | 57119 | gtex_brain_ba24 |
| rs10271371 | 7 | 12387587 | VWDE | ENSG00000146530.7 | 2.424E-9 | 0 | 55980 | gtex_brain_ba24 |
| rs4461794 | 7 | 12388751 | VWDE | ENSG00000146530.7 | 9.193E-10 | 0 | 54816 | gtex_brain_ba24 |
| rs10280000 | 7 | 12389698 | VWDE | ENSG00000146530.7 | 9.471E-10 | 0 | 53869 | gtex_brain_ba24 |
| rs10236623 | 7 | 12389752 | VWDE | ENSG00000146530.7 | 9.471E-10 | 0 | 53815 | gtex_brain_ba24 |
| rs4532495 | 7 | 12390303 | VWDE | ENSG00000146530.7 | 9.425E-10 | 0 | 53264 | gtex_brain_ba24 |
| rs6966459 | 7 | 12390687 | VWDE | ENSG00000146530.7 | 9.261E-10 | 0 | 52880 | gtex_brain_ba24 |
| rs6966667 | 7 | 12391005 | VWDE | ENSG00000146530.7 | 9.261E-10 | 0 | 52562 | gtex_brain_ba24 |
| rs12699364 | 7 | 12392505 | VWDE | ENSG00000146530.7 | 9.327E-10 | 0 | 51062 | gtex_brain_ba24 |
| rs34642611 | 7 | 12396085 | VWDE | ENSG00000146530.7 | 4.911E-9 | 0 | 47482 | gtex_brain_ba24 |
| rs12537184 | 7 | 12397842 | VWDE | ENSG00000146530.7 | 1.034E-8 | 0 | 45725 | gtex_brain_ba24 |
| rs12699365 | 7 | 12404475 | VWDE | ENSG00000146530.7 | 4.133E-9 | 0 | 39092 | gtex_brain_ba24 |
| rs13247878 | 7 | 12406186 | VWDE | ENSG00000146530.7 | 1.663E-9 | 0 | 37381 | gtex_brain_ba24 |
| rs1371608 | 7 | 12406826 | VWDE | ENSG00000146530.7 | 1.125E-8 | 0 | 36741 | gtex_brain_ba24 |
| rs6460939 | 7 | 12406989 | VWDE | ENSG00000146530.7 | 1.07E-8 | 0 | 36578 | gtex_brain_ba24 |
| rs12699366 | 7 | 12418514 | VWDE | ENSG00000146530.7 | 3.527E-11 | 0 | 25053 | gtex_brain_ba24 |
| rs10255135 | 7 | 12418863 | VWDE | ENSG00000146530.7 | 3.063E-9 | 0 | 24704 | gtex_brain_ba24 |
| rs10499421 | 7 | 12418938 | VWDE | ENSG00000146530.7 | 3.144E-10 | 0 | 24629 | gtex_brain_ba24 |
| rs10270931 | 7 | 12418964 | VWDE | ENSG00000146530.7 | 3.887E-7 | 0 | 24603 | gtex_brain_ba24 |
| rs12699367 | 7 | 12422721 | VWDE | ENSG00000146530.7 | 1.739E-9 | 0 | 20846 | gtex_brain_ba24 |
| rs7784253 | 7 | 12422982 | VWDE | ENSG00000146530.7 | 4.262E-8 | 0 | 20585 | gtex_brain_ba24 |
| rs1036667 | 7 | 12424583 | VWDE | ENSG00000146530.7 | 4.89E-8 | 0 | 18984 | gtex_brain_ba24 |
| rs5882358 | 7 | 12425429 | VWDE | ENSG00000146530.7 | 3.895E-7 | 0 | 18138 | gtex_brain_ba24 |
| rs1550390 | 7 | 12425934 | VWDE | ENSG00000146530.7 | 4.262E-8 | 0 | 17633 | gtex_brain_ba24 |
| rs848020 | 7 | 12427230 | VWDE | ENSG00000146530.7 | 3.492E-8 | 0 | 16337 | gtex_brain_ba24 |
| rs848016 | 7 | 12428803 | VWDE | ENSG00000146530.7 | 3.663E-10 | 0 | 14764 | gtex_brain_ba24 |
| rs848015 | 7 | 12429112 | VWDE | ENSG00000146530.7 | 4.733E-10 | 0 | 14455 | gtex_brain_ba24 |
| rs848004 | 7 | 12434771 | VWDE | ENSG00000146530.7 | 2.543E-10 | 0 | 8796 | gtex_brain_ba24 |
| rs848003 | 7 | 12435765 | VWDE | ENSG00000146530.7 | 2.543E-10 | 0 | 7802 | gtex_brain_ba24 |
| rs847995 | 7 | 12439392 | VWDE | ENSG00000146530.7 | 2.543E-10 | 0 | 4175 | gtex_brain_ba24 |
| rs847907 | 7 | 12458629 | VWDE | ENSG00000146530.7 | 8.894E-10 | 0 | -15062 | gtex_brain_ba24 |
| rs78486051 | 7 | 12468233 | VWDE | ENSG00000146530.7 | 4.167E-10 | 0 | -24666 | gtex_brain_ba24 |
| rs1100148 | 7 | 12469510 | VWDE | ENSG00000146530.7 | 5.079E-8 | 0 | -25943 | gtex_brain_ba24 |
| rs1100146 | 7 | 12470236 | VWDE | ENSG00000146530.7 | 1.548E-8 | 0 | -26669 | gtex_brain_ba24 |
| rs1100145 | 7 | 12470535 | VWDE | ENSG00000146530.7 | 1.42E-8 | 0 | -26968 | gtex_brain_ba24 |
| rs1071035 | 7 | 12471749 | VWDE | ENSG00000146530.7 | 2.186E-10 | 0 | -28182 | gtex_brain_ba24 |
| rs847980 | 7 | 12475868 | VWDE | ENSG00000146530.7 | 5.172E-10 | 0 | -32301 | gtex_brain_ba24 |
| rs10281615 | 7 | 12486659 | VWDE | ENSG00000146530.7 | 1.912E-8 | 0 | -43092 | gtex_brain_ba24 |
| rs847968 | 7 | 12487239 | VWDE | ENSG00000146530.7 | 9.313E-9 | 0 | -43672 | gtex_brain_ba24 |
| rs1100143 | 7 | 12489204 | VWDE | ENSG00000146530.7 | 9.288E-9 | 0 | -45637 | gtex_brain_ba24 |
| rs1100138 | 7 | 12491405 | VWDE | ENSG00000146530.7 | 1.54E-8 | 0 | -47838 | gtex_brain_ba24 |
| rs1100136 | 7 | 12491829 | VWDE | ENSG00000146530.7 | 9.38E-9 | 0 | -48262 | gtex_brain_ba24 |
| rs1100135 | 7 | 12491847 | VWDE | ENSG00000146530.7 | 1.315E-8 | 0 | -48280 | gtex_brain_ba24 |
| rs848029 | 7 | 12498539 | VWDE | ENSG00000146530.7 | 8.374E-9 | 0 | -54972 | gtex_brain_ba24 |
| rs848027 | 7 | 12500261 | VWDE | ENSG00000146530.7 | 7.381E-9 | 0 | -56694 | gtex_brain_ba24 |
| rs4721083 | 7 | 12343003 | VWDE | ENSG00000146530.7 | 1.582E-6 | 0 | 100564 | gtex_brain_putamen_basal |
| rs7790790 | 7 | 12346488 | VWDE | ENSG00000146530.7 | 3.106E-7 | 0 | 97079 | gtex_brain_putamen_basal |
| rs4721084 | 7 | 12352437 | VWDE | ENSG00000146530.7 | 4.054E-7 | 0 | 91130 | gtex_brain_putamen_basal |
| rs2110802 | 7 | 12356118 | VWDE | ENSG00000146530.7 | 2.033E-7 | 0 | 87449 | gtex_brain_putamen_basal |
| rs6945190 | 7 | 12357020 | VWDE | ENSG00000146530.7 | 2.033E-7 | 0 | 86547 | gtex_brain_putamen_basal |
| rs2119141 | 7 | 12395813 | VWDE | ENSG00000146530.7 | 2.698E-7 | 0 | 47754 | gtex_brain_putamen_basal |
| rs6460937 | 7 | 12406367 | VWDE | ENSG00000146530.7 | 1.298E-6 | 0 | 37200 | gtex_brain_putamen_basal |
| rs7785905 | 7 | 12410707 | VWDE | ENSG00000146530.7 | 1.239E-7 | 0 | 32860 | gtex_brain_putamen_basal |
| rs17275374 | 7 | 12410844 | VWDE | ENSG00000146530.7 | 1.239E-7 | 0 | 32723 | gtex_brain_putamen_basal |
| rs17275416 | 7 | 12411307 | VWDE | ENSG00000146530.7 | 4.646E-8 | 0 | 32260 | gtex_brain_putamen_basal |
| rs17190390 | 7 | 12411371 | VWDE | ENSG00000146530.7 | 4.679E-8 | 0 | 32196 | gtex_brain_putamen_basal |
| rs17275527 | 7 | 12411500 | VWDE | ENSG00000146530.7 | 4.646E-8 | 0 | 32067 | gtex_brain_putamen_basal |
| rs7791259 | 7 | 12411733 | VWDE | ENSG00000146530.7 | 3.759E-8 | 0 | 31834 | gtex_brain_putamen_basal |
| rs17165929 | 7 | 12413005 | VWDE | ENSG00000146530.7 | 2.848E-8 | 0 | 30562 | gtex_brain_putamen_basal |
| rs17165934 | 7 | 12413985 | VWDE | ENSG00000146530.7 | 4.646E-8 | 0 | 29582 | gtex_brain_putamen_basal |
| rs6945357 | 7 | 12414620 | VWDE | ENSG00000146530.7 | 4.646E-8 | 0 | 28947 | gtex_brain_putamen_basal |
| rs6460940 | 7 | 12414993 | VWDE | ENSG00000146530.7 | 1.239E-7 | 0 | 28574 | gtex_brain_putamen_basal |
| rs7802736 | 7 | 12415349 | VWDE | ENSG00000146530.7 | 4.646E-8 | 0 | 28218 | gtex_brain_putamen_basal |
| rs17165942 | 7 | 12415923 | VWDE | ENSG00000146530.7 | 4.646E-8 | 0 | 27644 | gtex_brain_putamen_basal |
| rs66889572 | 7 | 12415944 | VWDE | ENSG00000146530.7 | 4.646E-8 | 0 | 27623 | gtex_brain_putamen_basal |
| rs1440024 | 7 | 12416367 | VWDE | ENSG00000146530.7 | 1.239E-7 | 0 | 27200 | gtex_brain_putamen_basal |
| rs7789937 | 7 | 12417213 | VWDE | ENSG00000146530.7 | 4.646E-8 | 0 | 26354 | gtex_brain_putamen_basal |
| rs1020152 | 7 | 12448822 | VWDE | ENSG00000146530.7 | 1.573E-6 | 0 | -5255 | gtex_brain_putamen_basal |
| rs17541429 | 7 | 12462573 | VWDE | ENSG00000146530.7 | 1.322E-6 | 0 | -19006 | gtex_brain_putamen_basal |
| rs7796561 | 7 | 12466081 | VWDE | ENSG00000146530.7 | 1.556E-6 | 0 | -22514 | gtex_brain_putamen_basal |
| rs114152255 | 7 | 12470369 | VWDE | ENSG00000146530.7 | 1.097E-6 | 0 | -26802 | gtex_brain_putamen_basal |
| rs6971764 | 7 | 12470603 | VWDE | ENSG00000146530.7 | 1.586E-6 | 0 | -27036 | gtex_brain_putamen_basal |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression during devlopment (BrainCloud)
Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| SENGUPTA NASOPHARYNGEAL CARCINOMA WITH LMP1 UP | 408 | 247 | All SZGR 2.0 genes in this pathway |
| JAATINEN HEMATOPOIETIC STEM CELL UP | 316 | 190 | All SZGR 2.0 genes in this pathway |
| GOZGIT ESR1 TARGETS UP | 149 | 84 | All SZGR 2.0 genes in this pathway |
| LI CISPLATIN RESISTANCE UP | 28 | 20 | All SZGR 2.0 genes in this pathway |
| ACEVEDO LIVER CANCER WITH H3K27ME3 UP | 295 | 149 | All SZGR 2.0 genes in this pathway |
| ACEVEDO LIVER CANCER WITH H3K9ME3 UP | 141 | 75 | All SZGR 2.0 genes in this pathway |
| ZWANG DOWN BY 2ND EGF PULSE | 293 | 119 | All SZGR 2.0 genes in this pathway |
| NABA ECM GLYCOPROTEINS | 196 | 99 | All SZGR 2.0 genes in this pathway |
| NABA CORE MATRISOME | 275 | 148 | All SZGR 2.0 genes in this pathway |
| NABA MATRISOME | 1028 | 559 | All SZGR 2.0 genes in this pathway |