Gene Page: EFR3B

Summary ?
GeneID22979
SymbolEFR3B
SynonymsKIAA0953
DescriptionEFR3 homolog B
ReferenceMIM:616797|HGNC:HGNC:29155|Ensembl:ENSG00000084710|Vega:OTTHUMG00000151988
Gene typeprotein-coding
Map location2p23.3
Pascal p-value7.578E-4
SupportG2Cdb.humanPSD
G2Cdb.humanPSP

Gene in Data Sources
Gene set name Method of gene setDescriptionInfo
CV:PGCnpGenome-wide Association StudyGWAS

Section I. Genetics and epigenetics annotation


Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

Top co-expressed genes in brain regions

Top 10 positively co-expressed genes
GenePearson's Correlation Spearman's Correlation
RAI140.910.92
MLLT40.910.94
NFIB0.900.88
C10orf120.890.90
ZNF4620.890.94
MYST40.880.95
SETBP10.870.92
SOX110.870.88
ITSN10.870.88
MYST30.870.95
Top 10 negatively co-expressed genes
GenePearson's Correlation Spearman's Correlation
TNFSF12-0.55-0.67
LHPP-0.54-0.61
SLC9A3R2-0.54-0.42
C5orf53-0.53-0.78
TMEM54-0.53-0.64
FBXO2-0.53-0.69
PTH1R-0.53-0.71
HLA-F-0.52-0.75
PPAP2A-0.52-0.51
SLC16A11-0.52-0.64

Section V. Pathway annotation

Pathway namePathway size# SZGR 2.0 genes in pathwayInfo
BERTUCCI MEDULLARY VS DUCTAL BREAST CANCER DN 169118All SZGR 2.0 genes in this pathway
CHARAFE BREAST CANCER LUMINAL VS BASAL UP 380215All SZGR 2.0 genes in this pathway
DUTERTRE ESTRADIOL RESPONSE 24HR DN 505328All SZGR 2.0 genes in this pathway
GOBERT OLIGODENDROCYTE DIFFERENTIATION DN 1080713All SZGR 2.0 genes in this pathway
FORTSCHEGGER PHF8 TARGETS DN 784464All SZGR 2.0 genes in this pathway
RATTENBACHER BOUND BY CELF1 467251All SZGR 2.0 genes in this pathway