Gene Page: RNF180

Summary ?
GeneID285671
SymbolRNF180
SynonymsRINES
Descriptionring finger protein 180
ReferenceMIM:616015|HGNC:HGNC:27752|Ensembl:ENSG00000164197|HPRD:15263|Vega:OTTHUMG00000162278
Gene typeprotein-coding
Map location5q12.3
Pascal p-value1.321E-4
eGeneCerebellar Hemisphere
Cerebellum
Putamen basal ganglia
Meta

Gene in Data Sources
Gene set name Method of gene setDescriptionInfo
CV:PGCnpGenome-wide Association StudyGWAS

Section I. Genetics and epigenetics annotation

@eQTL annotation

SNP IDChromosomePositioneGeneGene Entrez IDpvalueqvalueTSS distanceeQTL type
rs73103167563585697RNF180ENSG00000164197.72.9872E-60.04124026gtex_brain_putamen_basal
rs112828058563684554RNF180ENSG00000164197.72.78766E-60.04222883gtex_brain_putamen_basal
rs111804947563684569RNF180ENSG00000164197.72.78766E-60.04222898gtex_brain_putamen_basal
rs73106914563689107RNF180ENSG00000164197.72.80276E-60.04227436gtex_brain_putamen_basal

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

No co-expressed genes in brain regions


Section V. Pathway annotation

Pathway namePathway size# SZGR 2.0 genes in pathwayInfo
VECCHI GASTRIC CANCER EARLY DN 367220All SZGR 2.0 genes in this pathway
DAWSON METHYLATED IN LYMPHOMA TCL1 5945All SZGR 2.0 genes in this pathway
MARIADASON RESPONSE TO BUTYRATE SULINDAC 6 5232All SZGR 2.0 genes in this pathway
CHANDRAN METASTASIS DN 306191All SZGR 2.0 genes in this pathway
CHYLA CBFA2T3 TARGETS UP 387225All SZGR 2.0 genes in this pathway
BRUINS UVC RESPONSE VIA TP53 GROUP A 898516All SZGR 2.0 genes in this pathway