Gene Page: DHRS4L2
Summary ?
| GeneID | 317749 |
| Symbol | DHRS4L2 |
| Synonyms | SDR25C3 |
| Description | dehydrogenase/reductase (SDR family) member 4 like 2 |
| Reference | MIM:615196|HGNC:HGNC:19731|Ensembl:ENSG00000187630|HPRD:10880|Vega:OTTHUMG00000028778 |
| Gene type | protein-coding |
| Map location | 14q11.2 |
| Pascal p-value | 0.665 |
| Sherlock p-value | 0.037 |
| Fetal beta | -0.464 |
| eGene | Anterior cingulate cortex BA24 Caudate basal ganglia Cerebellar Hemisphere Cerebellum Cortex Frontal Cortex BA9 Nucleus accumbens basal ganglia Putamen basal ganglia Meta |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| GSMA_I | Genome scan meta-analysis | Psr: 0.047 |
Section I. Genetics and epigenetics annotation
eQTL annotation
| SNP ID | Chromosome | Position | eGene | Gene Entrez ID | pvalue | qvalue | TSS distance | eQTL type |
|---|---|---|---|---|---|---|---|---|
| rs1951737 | 14 | 24422795 | DHRS4L2 | ENSG00000187630.10 | 6.638E-7 | 0.02 | -16353 | gtex_brain_ba24 |
| rs12147221 | 14 | 24424367 | DHRS4L2 | ENSG00000187630.10 | 2.683E-7 | 0.02 | -14781 | gtex_brain_ba24 |
| rs112772981 | 14 | 24425993 | DHRS4L2 | ENSG00000187630.10 | 7.95E-7 | 0.02 | -13155 | gtex_brain_ba24 |
| rs149435678 | 14 | 24405963 | DHRS4L2 | ENSG00000187630.10 | 2.232E-7 | 0 | -33185 | gtex_brain_putamen_basal |
| rs11350813 | 14 | 24407139 | DHRS4L2 | ENSG00000187630.10 | 2.344E-8 | 0 | -32009 | gtex_brain_putamen_basal |
| rs10701524 | 14 | 24408113 | DHRS4L2 | ENSG00000187630.10 | 2.341E-8 | 0 | -31035 | gtex_brain_putamen_basal |
| rs59297309 | 14 | 24408398 | DHRS4L2 | ENSG00000187630.10 | 2.341E-8 | 0 | -30750 | gtex_brain_putamen_basal |
| rs1885810 | 14 | 24408866 | DHRS4L2 | ENSG00000187630.10 | 2.334E-8 | 0 | -30282 | gtex_brain_putamen_basal |
| rs112851730 | 14 | 24409687 | DHRS4L2 | ENSG00000187630.10 | 2.485E-8 | 0 | -29461 | gtex_brain_putamen_basal |
| rs113459990 | 14 | 24409729 | DHRS4L2 | ENSG00000187630.10 | 2.341E-8 | 0 | -29419 | gtex_brain_putamen_basal |
| rs113551151 | 14 | 24409799 | DHRS4L2 | ENSG00000187630.10 | 2.478E-8 | 0 | -29349 | gtex_brain_putamen_basal |
| rs8003491 | 14 | 24410030 | DHRS4L2 | ENSG00000187630.10 | 2.334E-8 | 0 | -29118 | gtex_brain_putamen_basal |
| rs8003627 | 14 | 24410092 | DHRS4L2 | ENSG00000187630.10 | 2.334E-8 | 0 | -29056 | gtex_brain_putamen_basal |
| rs58941536 | 14 | 24410262 | DHRS4L2 | ENSG00000187630.10 | 2.087E-8 | 0 | -28886 | gtex_brain_putamen_basal |
| rs57901513 | 14 | 24410417 | DHRS4L2 | ENSG00000187630.10 | 1.886E-8 | 0 | -28731 | gtex_brain_putamen_basal |
| rs8004361 | 14 | 24410543 | DHRS4L2 | ENSG00000187630.10 | 1.741E-8 | 0 | -28605 | gtex_brain_putamen_basal |
| rs8004860 | 14 | 24410800 | DHRS4L2 | ENSG00000187630.10 | 1.717E-8 | 0 | -28348 | gtex_brain_putamen_basal |
| rs8009382 | 14 | 24411035 | DHRS4L2 | ENSG00000187630.10 | 1.717E-8 | 0 | -28113 | gtex_brain_putamen_basal |
| rs8011236 | 14 | 24411066 | DHRS4L2 | ENSG00000187630.10 | 1.717E-8 | 0 | -28082 | gtex_brain_putamen_basal |
| rs73598777 | 14 | 24411626 | DHRS4L2 | ENSG00000187630.10 | 1.414E-8 | 0 | -27522 | gtex_brain_putamen_basal |
| rs73598781 | 14 | 24411714 | DHRS4L2 | ENSG00000187630.10 | 1.717E-8 | 0 | -27434 | gtex_brain_putamen_basal |
| rs57461315 | 14 | 24411851 | DHRS4L2 | ENSG00000187630.10 | 1.717E-8 | 0 | -27297 | gtex_brain_putamen_basal |
| rs7149475 | 14 | 24411868 | DHRS4L2 | ENSG00000187630.10 | 1.717E-8 | 0 | -27280 | gtex_brain_putamen_basal |
| rs58920623 | 14 | 24411883 | DHRS4L2 | ENSG00000187630.10 | 1.717E-8 | 0 | -27265 | gtex_brain_putamen_basal |
| rs7153995 | 14 | 24411962 | DHRS4L2 | ENSG00000187630.10 | 1.722E-8 | 0 | -27186 | gtex_brain_putamen_basal |
| rs57978986 | 14 | 24412217 | DHRS4L2 | ENSG00000187630.10 | 1.712E-8 | 0 | -26931 | gtex_brain_putamen_basal |
| rs59484581 | 14 | 24412279 | DHRS4L2 | ENSG00000187630.10 | 1.712E-8 | 0 | -26869 | gtex_brain_putamen_basal |
| rs60939040 | 14 | 24412292 | DHRS4L2 | ENSG00000187630.10 | 1.712E-8 | 0 | -26856 | gtex_brain_putamen_basal |
| rs58909995 | 14 | 24412383 | DHRS4L2 | ENSG00000187630.10 | 1.712E-8 | 0 | -26765 | gtex_brain_putamen_basal |
| rs112845645 | 14 | 24412589 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -26559 | gtex_brain_putamen_basal |
| rs11852080 | 14 | 24412772 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -26376 | gtex_brain_putamen_basal |
| rs11852089 | 14 | 24412847 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -26301 | gtex_brain_putamen_basal |
| rs11847840 | 14 | 24412916 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -26232 | gtex_brain_putamen_basal |
| rs28828113 | 14 | 24413307 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -25841 | gtex_brain_putamen_basal |
| rs58469981 | 14 | 24413419 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -25729 | gtex_brain_putamen_basal |
| rs60887662 | 14 | 24413737 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -25411 | gtex_brain_putamen_basal |
| rs60901156 | 14 | 24413773 | DHRS4L2 | ENSG00000187630.10 | 3.544E-9 | 0 | -25375 | gtex_brain_putamen_basal |
| rs61368402 | 14 | 24413854 | DHRS4L2 | ENSG00000187630.10 | 5.373E-9 | 0 | -25294 | gtex_brain_putamen_basal |
| rs59324945 | 14 | 24414624 | DHRS4L2 | ENSG00000187630.10 | 9.04E-9 | 0 | -24524 | gtex_brain_putamen_basal |
| rs58786866 | 14 | 24414625 | DHRS4L2 | ENSG00000187630.10 | 9.043E-9 | 0 | -24523 | gtex_brain_putamen_basal |
| rs55897938 | 14 | 24414654 | DHRS4L2 | ENSG00000187630.10 | 3.227E-8 | 0 | -24494 | gtex_brain_putamen_basal |
| rs139983293 | 14 | 24414686 | DHRS4L2 | ENSG00000187630.10 | 2.508E-8 | 0 | -24462 | gtex_brain_putamen_basal |
| rs111571149 | 14 | 24414712 | DHRS4L2 | ENSG00000187630.10 | 2.508E-8 | 0 | -24436 | gtex_brain_putamen_basal |
| rs111652247 | 14 | 24414719 | DHRS4L2 | ENSG00000187630.10 | 2.482E-8 | 0 | -24429 | gtex_brain_putamen_basal |
| rs112608884 | 14 | 24414795 | DHRS4L2 | ENSG00000187630.10 | 2.239E-8 | 0 | -24353 | gtex_brain_putamen_basal |
| rs112256515 | 14 | 24414798 | DHRS4L2 | ENSG00000187630.10 | 1.063E-8 | 0 | -24350 | gtex_brain_putamen_basal |
| rs112782991 | 14 | 24414811 | DHRS4L2 | ENSG00000187630.10 | 5.384E-9 | 0 | -24337 | gtex_brain_putamen_basal |
| rs146235009 | 14 | 24414911 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -24237 | gtex_brain_putamen_basal |
| rs9671870 | 14 | 24415009 | DHRS4L2 | ENSG00000187630.10 | 3.544E-9 | 0 | -24139 | gtex_brain_putamen_basal |
| rs150174008 | 14 | 24415058 | DHRS4L2 | ENSG00000187630.10 | 3.53E-9 | 0 | -24090 | gtex_brain_putamen_basal |
| rs9671445 | 14 | 24415230 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -23918 | gtex_brain_putamen_basal |
| rs9671883 | 14 | 24415317 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -23831 | gtex_brain_putamen_basal |
| rs9671467 | 14 | 24415578 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -23570 | gtex_brain_putamen_basal |
| rs9671588 | 14 | 24415589 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -23559 | gtex_brain_putamen_basal |
| rs146909516 | 14 | 24415719 | DHRS4L2 | ENSG00000187630.10 | 2.762E-10 | 0 | -23429 | gtex_brain_putamen_basal |
| rs28856896 | 14 | 24415733 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -23415 | gtex_brain_putamen_basal |
| rs7140888 | 14 | 24416128 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -23020 | gtex_brain_putamen_basal |
| rs7141234 | 14 | 24416322 | DHRS4L2 | ENSG00000187630.10 | 5.38E-9 | 0 | -22826 | gtex_brain_putamen_basal |
| rs7158222 | 14 | 24416333 | DHRS4L2 | ENSG00000187630.10 | 5.366E-9 | 0 | -22815 | gtex_brain_putamen_basal |
| rs7141463 | 14 | 24416467 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -22681 | gtex_brain_putamen_basal |
| rs7156624 | 14 | 24416528 | DHRS4L2 | ENSG00000187630.10 | 5.38E-9 | 0 | -22620 | gtex_brain_putamen_basal |
| rs7141633 | 14 | 24416557 | DHRS4L2 | ENSG00000187630.10 | 4.07E-10 | 0 | -22591 | gtex_brain_putamen_basal |
| rs7141804 | 14 | 24416657 | DHRS4L2 | ENSG00000187630.10 | 2.742E-8 | 0 | -22491 | gtex_brain_putamen_basal |
| rs76596542 | 14 | 24417153 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -21995 | gtex_brain_putamen_basal |
| rs140921430 | 14 | 24417221 | DHRS4L2 | ENSG00000187630.10 | 5.363E-9 | 0 | -21927 | gtex_brain_putamen_basal |
| rs9805889 | 14 | 24417399 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -21749 | gtex_brain_putamen_basal |
| rs9805882 | 14 | 24417420 | DHRS4L2 | ENSG00000187630.10 | 3.544E-9 | 0 | -21728 | gtex_brain_putamen_basal |
| rs9806029 | 14 | 24417546 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -21602 | gtex_brain_putamen_basal |
| rs10142568 | 14 | 24417796 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -21352 | gtex_brain_putamen_basal |
| rs28836502 | 14 | 24417944 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -21204 | gtex_brain_putamen_basal |
| rs28881586 | 14 | 24417982 | DHRS4L2 | ENSG00000187630.10 | 2.944E-9 | 0 | -21166 | gtex_brain_putamen_basal |
| rs9805913 | 14 | 24418347 | DHRS4L2 | ENSG00000187630.10 | 2.742E-8 | 0 | -20801 | gtex_brain_putamen_basal |
| rs9323424 | 14 | 24418528 | DHRS4L2 | ENSG00000187630.10 | 5.324E-9 | 0 | -20620 | gtex_brain_putamen_basal |
| rs9323425 | 14 | 24418547 | DHRS4L2 | ENSG00000187630.10 | 5.359E-9 | 0 | -20601 | gtex_brain_putamen_basal |
| rs9323426 | 14 | 24418655 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -20493 | gtex_brain_putamen_basal |
| rs1957678 | 14 | 24418726 | DHRS4L2 | ENSG00000187630.10 | 6.692E-9 | 0 | -20422 | gtex_brain_putamen_basal |
| rs9323428 | 14 | 24418752 | DHRS4L2 | ENSG00000187630.10 | 6.688E-9 | 0 | -20396 | gtex_brain_putamen_basal |
| rs9323429 | 14 | 24418771 | DHRS4L2 | ENSG00000187630.10 | 5.359E-9 | 0 | -20377 | gtex_brain_putamen_basal |
| rs7152712 | 14 | 24419202 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -19946 | gtex_brain_putamen_basal |
| rs10150939 | 14 | 24419271 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -19877 | gtex_brain_putamen_basal |
| rs7152902 | 14 | 24419274 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -19874 | gtex_brain_putamen_basal |
| rs6573469 | 14 | 24419422 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -19726 | gtex_brain_putamen_basal |
| rs6573470 | 14 | 24419512 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -19636 | gtex_brain_putamen_basal |
| rs6573471 | 14 | 24419616 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -19532 | gtex_brain_putamen_basal |
| rs61272519 | 14 | 24419650 | DHRS4L2 | ENSG00000187630.10 | 2.122E-8 | 0 | -19498 | gtex_brain_putamen_basal |
| rs6573472 | 14 | 24419672 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -19476 | gtex_brain_putamen_basal |
| rs6573473 | 14 | 24419756 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -19392 | gtex_brain_putamen_basal |
| rs6573474 | 14 | 24419839 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -19309 | gtex_brain_putamen_basal |
| rs10145440 | 14 | 24420034 | DHRS4L2 | ENSG00000187630.10 | 3.542E-9 | 0 | -19114 | gtex_brain_putamen_basal |
| rs35470512 | 14 | 24420117 | DHRS4L2 | ENSG00000187630.10 | 3.542E-9 | 0 | -19031 | gtex_brain_putamen_basal |
| rs114801506 | 14 | 24420260 | DHRS4L2 | ENSG00000187630.10 | 1.258E-6 | 0 | -18888 | gtex_brain_putamen_basal |
| rs116117004 | 14 | 24420266 | DHRS4L2 | ENSG00000187630.10 | 1.258E-6 | 0 | -18882 | gtex_brain_putamen_basal |
| rs115495758 | 14 | 24420271 | DHRS4L2 | ENSG00000187630.10 | 1.266E-6 | 0 | -18877 | gtex_brain_putamen_basal |
| rs74036725 | 14 | 24420323 | DHRS4L2 | ENSG00000187630.10 | 2.541E-9 | 0 | -18825 | gtex_brain_putamen_basal |
| rs73600716 | 14 | 24420329 | DHRS4L2 | ENSG00000187630.10 | 2.539E-9 | 0 | -18819 | gtex_brain_putamen_basal |
| rs73600717 | 14 | 24420372 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -18776 | gtex_brain_putamen_basal |
| rs74036727 | 14 | 24420427 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -18721 | gtex_brain_putamen_basal |
| rs60177702 | 14 | 24420498 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -18650 | gtex_brain_putamen_basal |
| rs59434518 | 14 | 24420597 | DHRS4L2 | ENSG00000187630.10 | 1.141E-8 | 0 | -18551 | gtex_brain_putamen_basal |
| rs28693392 | 14 | 24420642 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -18506 | gtex_brain_putamen_basal |
| rs28670278 | 14 | 24420956 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -18192 | gtex_brain_putamen_basal |
| rs61710531 | 14 | 24421090 | DHRS4L2 | ENSG00000187630.10 | 5.324E-9 | 0 | -18058 | gtex_brain_putamen_basal |
| rs10148822 | 14 | 24421152 | DHRS4L2 | ENSG00000187630.10 | 1.357E-7 | 0 | -17996 | gtex_brain_putamen_basal |
| rs10148823 | 14 | 24421161 | DHRS4L2 | ENSG00000187630.10 | 5.37E-9 | 0 | -17987 | gtex_brain_putamen_basal |
| rs10149094 | 14 | 24421381 | DHRS4L2 | ENSG00000187630.10 | 5.37E-9 | 0 | -17767 | gtex_brain_putamen_basal |
| rs10137992 | 14 | 24421472 | DHRS4L2 | ENSG00000187630.10 | 3.518E-9 | 0 | -17676 | gtex_brain_putamen_basal |
| rs74036728 | 14 | 24421664 | DHRS4L2 | ENSG00000187630.10 | 1.633E-8 | 0 | -17484 | gtex_brain_putamen_basal |
| rs74036729 | 14 | 24421676 | DHRS4L2 | ENSG00000187630.10 | 1.633E-8 | 0 | -17472 | gtex_brain_putamen_basal |
| rs17099424 | 14 | 24421841 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -17307 | gtex_brain_putamen_basal |
| rs112725630 | 14 | 24421874 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -17274 | gtex_brain_putamen_basal |
| rs142400275 | 14 | 24422016 | DHRS4L2 | ENSG00000187630.10 | 2.674E-9 | 0 | -17132 | gtex_brain_putamen_basal |
| rs4048603 | 14 | 24422030 | DHRS4L2 | ENSG00000187630.10 | 1.132E-8 | 0 | -17118 | gtex_brain_putamen_basal |
| rs10141091 | 14 | 24422366 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -16782 | gtex_brain_putamen_basal |
| rs72443690 | 14 | 24422377 | DHRS4L2 | ENSG00000187630.10 | 3.537E-9 | 0 | -16771 | gtex_brain_putamen_basal |
| rs10151793 | 14 | 24422585 | DHRS4L2 | ENSG00000187630.10 | 3.542E-9 | 0 | -16563 | gtex_brain_putamen_basal |
| rs1951736 | 14 | 24422733 | DHRS4L2 | ENSG00000187630.10 | 3.537E-9 | 0 | -16415 | gtex_brain_putamen_basal |
| rs1951737 | 14 | 24422795 | DHRS4L2 | ENSG00000187630.10 | 1.248E-7 | 0 | -16353 | gtex_brain_putamen_basal |
| rs78299733 | 14 | 24422915 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -16233 | gtex_brain_putamen_basal |
| rs112883733 | 14 | 24422936 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -16212 | gtex_brain_putamen_basal |
| rs113357631 | 14 | 24422946 | DHRS4L2 | ENSG00000187630.10 | 1.265E-9 | 0 | -16202 | gtex_brain_putamen_basal |
| rs4457918 | 14 | 24422995 | DHRS4L2 | ENSG00000187630.10 | 6.495E-8 | 0 | -16153 | gtex_brain_putamen_basal |
| rs17099455 | 14 | 24423007 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -16141 | gtex_brain_putamen_basal |
| rs8007763 | 14 | 24423329 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -15819 | gtex_brain_putamen_basal |
| rs8009022 | 14 | 24423370 | DHRS4L2 | ENSG00000187630.10 | 3.539E-9 | 0 | -15778 | gtex_brain_putamen_basal |
| rs8010151 | 14 | 24423582 | DHRS4L2 | ENSG00000187630.10 | 3.543E-9 | 0 | -15566 | gtex_brain_putamen_basal |
| rs8009599 | 14 | 24423666 | DHRS4L2 | ENSG00000187630.10 | 3.563E-9 | 0 | -15482 | gtex_brain_putamen_basal |
| rs11158470 | 14 | 24423918 | DHRS4L2 | ENSG00000187630.10 | 3.565E-9 | 0 | -15230 | gtex_brain_putamen_basal |
| rs12147221 | 14 | 24424367 | DHRS4L2 | ENSG00000187630.10 | 1.449E-8 | 0 | -14781 | gtex_brain_putamen_basal |
| rs10137990 | 14 | 24425058 | DHRS4L2 | ENSG00000187630.10 | 3.608E-9 | 0 | -14090 | gtex_brain_putamen_basal |
| rs2984817 | 14 | 24425427 | DHRS4L2 | ENSG00000187630.10 | 3.85E-8 | 0 | -13721 | gtex_brain_putamen_basal |
| rs58329055 | 14 | 24425732 | DHRS4L2 | ENSG00000187630.10 | 6.308E-8 | 0 | -13416 | gtex_brain_putamen_basal |
| rs112772981 | 14 | 24425993 | DHRS4L2 | ENSG00000187630.10 | 9.028E-8 | 0 | -13155 | gtex_brain_putamen_basal |
| rs112944764 | 14 | 24426320 | DHRS4L2 | ENSG00000187630.10 | 1.885E-7 | 0 | -12828 | gtex_brain_putamen_basal |
| rs145219936 | 14 | 24426595 | DHRS4L2 | ENSG00000187630.10 | 6.605E-8 | 0 | -12553 | gtex_brain_putamen_basal |
| rs66683150 | 14 | 24426764 | DHRS4L2 | ENSG00000187630.10 | 4.085E-8 | 0 | -12384 | gtex_brain_putamen_basal |
| rs73600730 | 14 | 24427358 | DHRS4L2 | ENSG00000187630.10 | 4.205E-8 | 0 | -11790 | gtex_brain_putamen_basal |
| rs6573484 | 14 | 24428285 | DHRS4L2 | ENSG00000187630.10 | 5.413E-9 | 0 | -10863 | gtex_brain_putamen_basal |
| rs6573485 | 14 | 24428385 | DHRS4L2 | ENSG00000187630.10 | 3.93E-9 | 0 | -10763 | gtex_brain_putamen_basal |
| rs6573486 | 14 | 24428509 | DHRS4L2 | ENSG00000187630.10 | 5.456E-9 | 0 | -10639 | gtex_brain_putamen_basal |
| rs6573487 | 14 | 24428545 | DHRS4L2 | ENSG00000187630.10 | 3.375E-8 | 0 | -10603 | gtex_brain_putamen_basal |
| rs6573488 | 14 | 24428555 | DHRS4L2 | ENSG00000187630.10 | 9.628E-8 | 0 | -10593 | gtex_brain_putamen_basal |
| rs7154783 | 14 | 24428762 | DHRS4L2 | ENSG00000187630.10 | 2.306E-8 | 0 | -10386 | gtex_brain_putamen_basal |
| rs7156226 | 14 | 24428798 | DHRS4L2 | ENSG00000187630.10 | 2.553E-8 | 0 | -10350 | gtex_brain_putamen_basal |
| rs148374592 | 14 | 24433294 | DHRS4L2 | ENSG00000187630.10 | 4.832E-7 | 0 | -5854 | gtex_brain_putamen_basal |
| rs200393732 | 14 | 24436511 | DHRS4L2 | ENSG00000187630.10 | 8.048E-7 | 0 | -2637 | gtex_brain_putamen_basal |
| rs79847141 | 14 | 24470231 | DHRS4L2 | ENSG00000187630.10 | 5.749E-7 | 0 | 31083 | gtex_brain_putamen_basal |
| rs200936205 | 14 | 24476041 | DHRS4L2 | ENSG00000187630.10 | 2.989E-7 | 0 | 36893 | gtex_brain_putamen_basal |
| rs146691898 | 14 | 24477942 | DHRS4L2 | ENSG00000187630.10 | 7.106E-7 | 0 | 38794 | gtex_brain_putamen_basal |
| rs147027077 | 14 | 24478799 | DHRS4L2 | ENSG00000187630.10 | 1.03E-7 | 0 | 39651 | gtex_brain_putamen_basal |
| rs77135979 | 14 | 24481452 | DHRS4L2 | ENSG00000187630.10 | 8.647E-7 | 0 | 42304 | gtex_brain_putamen_basal |
| rs79755169 | 14 | 24481993 | DHRS4L2 | ENSG00000187630.10 | 8.905E-7 | 0 | 42845 | gtex_brain_putamen_basal |
| rs77804326 | 14 | 24483660 | DHRS4L2 | ENSG00000187630.10 | 9.833E-7 | 0 | 44512 | gtex_brain_putamen_basal |
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression during devlopment (BrainCloud)
Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section III. Gene Ontology annotation
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|---|---|---|---|
| GO:0005488 | binding | IEA | - | |
| GO:0016491 | oxidoreductase activity | IEA | - | |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
| GO:0055114 | oxidation reduction | IEA | - | |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
| GO:0005576 | extracellular region | IEA | - |
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| KEGG RETINOL METABOLISM | 64 | 37 | All SZGR 2.0 genes in this pathway |
Section VI. microRNA annotation
| miRNA family | Target position | miRNA ID | miRNA seq | ||
|---|---|---|---|---|---|
| UTR start | UTR end | Match method | |||
| miR-149 | 30 | 37 | 1A,m8 | hsa-miR-149brain | UCUGGCUCCGUGUCUUCACUCC |
- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.