Gene Page: VSIG1
Summary ?
| GeneID | 340547 |
| Symbol | VSIG1 |
| Synonyms | 1700062D20Rik|GPA34|dJ889N15.1 |
| Description | V-set and immunoglobulin domain containing 1 |
| Reference | MIM:300620|HGNC:HGNC:28675|Ensembl:ENSG00000101842|HPRD:06655|Vega:OTTHUMG00000022175 |
| Gene type | protein-coding |
| Map location | Xq22.3 |
| Sherlock p-value | 0.022 |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression during devlopment (BrainCloud)
Footnote:
A total of 269 time points ploted, with n=38 fetal samples (x=1:38). Each triangle represents one time point.
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
No co-expressed genes in brain regions
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| JAATINEN HEMATOPOIETIC STEM CELL DN | 226 | 132 | All SZGR 2.0 genes in this pathway |
| LEE NAIVE T LYMPHOCYTE | 19 | 10 | All SZGR 2.0 genes in this pathway |