Summary ?
GeneID55717
SymbolWDR11
SynonymsBRWD2|DR11|HH14|WDR15
DescriptionWD repeat domain 11
ReferenceMIM:606417|HGNC:HGNC:13831|Ensembl:ENSG00000120008|HPRD:16218|Vega:OTTHUMG00000019171
Gene typeprotein-coding
Map location10q26
Pascal p-value0.671
eGeneAnterior cingulate cortex BA24
Caudate basal ganglia
Cerebellar Hemisphere
Cerebellum
Cortex
Frontal Cortex BA9
Hippocampus
Hypothalamus
Nucleus accumbens basal ganglia
Putamen basal ganglia
SupportCompositeSet
Ascano FMRP targets

Gene in Data Sources
Gene set name Method of gene setDescriptionInfo
DNM:Xu_2012Whole Exome Sequencing analysisDe novo mutations of 4 genes were identified by exome sequencing of 795 samples in this study
PMID:cooccurHigh-throughput literature-searchSystematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included.
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: schizophrenia,schizophreniasClick to show details

Section I. Genetics and epigenetics annotation

@DNM table

GeneChromosomePositionRefAltTranscriptAA changeMutation typeSiftCG46TraitStudy
WDR11chr10122664879GANM_018117
NR_049879
p.1081R>H
.
missense
intronic
SchizophreniaDNM:Xu_2012

@eQTL annotation

SNP IDChromosomePositioneGeneGene Entrez IDpvalueqvalueTSS distanceeQTL type
rs1119958810122593020WDR11ENSG00000120008.114.225E-70-17667gtex_brain_ba24
rs1088678010122601003WDR11ENSG00000120008.111.272E-60-9684gtex_brain_ba24
rs1119959110122604051WDR11ENSG00000120008.116.866E-70-6636gtex_brain_ba24
rs1088678510122610391WDR11ENSG00000120008.118.42E-70-296gtex_brain_ba24
rs1119959810122610657WDR11ENSG00000120008.118.608E-70-30gtex_brain_ba24
rs19953991210122611525WDR11ENSG00000120008.118.074E-70838gtex_brain_ba24
rs7220169510122611526WDR11ENSG00000120008.117.739E-70839gtex_brain_ba24
rs39811484910122612574WDR11ENSG00000120008.111.04E-601887gtex_brain_ba24
rs1225553910122614377WDR11ENSG00000120008.111.136E-703690gtex_brain_ba24
rs1224220410122614597WDR11ENSG00000120008.112.049E-703910gtex_brain_ba24
rs709253710122614904WDR11ENSG00000120008.112.045E-704217gtex_brain_ba24
rs709297710122615221WDR11ENSG00000120008.112.045E-704534gtex_brain_ba24
rs707504710122615258WDR11ENSG00000120008.112.041E-704571gtex_brain_ba24
rs1088678710122615653WDR11ENSG00000120008.112.029E-604966gtex_brain_ba24
rs790415310122616062WDR11ENSG00000120008.112.545E-605375gtex_brain_ba24
rs76879810122616358WDR11ENSG00000120008.111.926E-605671gtex_brain_ba24
rs76879910122616604WDR11ENSG00000120008.112.332E-605917gtex_brain_ba24
rs1119960110122616706WDR11ENSG00000120008.112.033E-706019gtex_brain_ba24
rs1119960210122616895WDR11ENSG00000120008.112.029E-706208gtex_brain_ba24
rs224184610122618148WDR11ENSG00000120008.116.172E-807461gtex_brain_ba24
rs1235963310122618810WDR11ENSG00000120008.111.992E-708123gtex_brain_ba24
rs1088678810122620251WDR11ENSG00000120008.112.015E-609564gtex_brain_ba24
rs1119960410122620616WDR11ENSG00000120008.111.934E-709929gtex_brain_ba24
rs3568858210122621303WDR11ENSG00000120008.111.934E-7010616gtex_brain_ba24
rs1710100110122621384WDR11ENSG00000120008.111.934E-7010697gtex_brain_ba24
rs3527076210122621663WDR11ENSG00000120008.111.229E-6010976gtex_brain_ba24
rs375850710122622838WDR11ENSG00000120008.111.893E-7012151gtex_brain_ba24
rs1226305110122623342WDR11ENSG00000120008.111.934E-7012655gtex_brain_ba24
rs1119960510122623606WDR11ENSG00000120008.114.456E-8012919gtex_brain_ba24
rs709274710122624202WDR11ENSG00000120008.112.015E-6013515gtex_brain_ba24
rs707691110122624270WDR11ENSG00000120008.112.015E-6013583gtex_brain_ba24
rs1088678910122624679WDR11ENSG00000120008.111.934E-7013992gtex_brain_ba24
rs321746910122625868WDR11ENSG00000120008.115.942E-8015181gtex_brain_ba24
rs228933510122626038WDR11ENSG00000120008.112.429E-7015351gtex_brain_ba24
rs475246810122626953WDR11ENSG00000120008.119.211E-8016266gtex_brain_ba24
rs1119960810122627668WDR11ENSG00000120008.111.076E-6016981gtex_brain_ba24
rs5979191510122628616WDR11ENSG00000120008.119.345E-8017929gtex_brain_ba24
rs20196425310122628617WDR11ENSG00000120008.111.882E-7017930gtex_brain_ba24
rs708269510122629088WDR11ENSG00000120008.111.001E-6018401gtex_brain_ba24
rs1235568410122629363WDR11ENSG00000120008.115.182E-8018676gtex_brain_ba24
rs1235567410122629393WDR11ENSG00000120008.112.357E-7018706gtex_brain_ba24
rs463985310122629423WDR11ENSG00000120008.119.433E-7018736gtex_brain_ba24
rs427414610122629522WDR11ENSG00000120008.111.92E-7018835gtex_brain_ba24
rs454854610122629579WDR11ENSG00000120008.111.976E-7018892gtex_brain_ba24
rs462063910122629743WDR11ENSG00000120008.114.133E-7019056gtex_brain_ba24
rs932556910122631067WDR11ENSG00000120008.115.949E-8020380gtex_brain_ba24
rs1046615710122633086WDR11ENSG00000120008.112.712E-7022399gtex_brain_ba24
rs1119961910122634099WDR11ENSG00000120008.112.618E-7023412gtex_brain_ba24
rs1119962010122634104WDR11ENSG00000120008.112.618E-7023417gtex_brain_ba24
rs3435203210122634406WDR11ENSG00000120008.115.209E-8023719gtex_brain_ba24
rs1278424910122634955WDR11ENSG00000120008.112.365E-7024268gtex_brain_ba24
rs1224748410122635088WDR11ENSG00000120008.112.365E-7024401gtex_brain_ba24
rs197285810122635232WDR11ENSG00000120008.111.15E-6024545gtex_brain_ba24
rs1088679110122635524WDR11ENSG00000120008.116.059E-8024837gtex_brain_ba24
rs200037810122636139WDR11ENSG00000120008.111.001E-6025452gtex_brain_ba24
rs1088679210122636553WDR11ENSG00000120008.112.365E-7025866gtex_brain_ba24
rs790798610122637544WDR11ENSG00000120008.111.178E-7026857gtex_brain_ba24
rs199227410122638073WDR11ENSG00000120008.112.365E-7027386gtex_brain_ba24
rs375850810122638836WDR11ENSG00000120008.111.002E-6028149gtex_brain_ba24
rs375850910122638860WDR11ENSG00000120008.112.365E-7028173gtex_brain_ba24
rs375851010122639170WDR11ENSG00000120008.111.002E-6028483gtex_brain_ba24
rs475180210122639311WDR11ENSG00000120008.112.365E-7028624gtex_brain_ba24
rs475180310122639741WDR11ENSG00000120008.111.002E-6029054gtex_brain_ba24
rs475180410122639901WDR11ENSG00000120008.111.002E-6029214gtex_brain_ba24
rs475180510122640243WDR11ENSG00000120008.111.002E-6029556gtex_brain_ba24
rs39779321610122641014WDR11ENSG00000120008.111.004E-6030327gtex_brain_ba24
rs475180610122641325WDR11ENSG00000120008.111.002E-6030638gtex_brain_ba24
rs1088679310122641884WDR11ENSG00000120008.112.365E-7031197gtex_brain_ba24
rs5974005810122642060WDR11ENSG00000120008.119.765E-8031373gtex_brain_ba24
rs792176710122642950WDR11ENSG00000120008.111.002E-6032263gtex_brain_ba24
rs475246910122643597WDR11ENSG00000120008.111.002E-6032910gtex_brain_ba24
rs475247010122643699WDR11ENSG00000120008.111.002E-6033012gtex_brain_ba24
rs462699410122644850WDR11ENSG00000120008.111.002E-6034163gtex_brain_ba24
rs440824310122644887WDR11ENSG00000120008.111.002E-6034200gtex_brain_ba24
rs437236210122644992WDR11ENSG00000120008.111.002E-6034305gtex_brain_ba24
rs658567210122645090WDR11ENSG00000120008.111.002E-6034403gtex_brain_ba24
rs789992810122645376WDR11ENSG00000120008.111.002E-6034689gtex_brain_ba24
rs790335610122645649WDR11ENSG00000120008.111.002E-6034962gtex_brain_ba24
rs1078812510122646070WDR11ENSG00000120008.115.856E-8035383gtex_brain_ba24
rs707952710122646113WDR11ENSG00000120008.111.002E-6035426gtex_brain_ba24
rs707978110122646126WDR11ENSG00000120008.112.365E-7035439gtex_brain_ba24
rs707983010122646379WDR11ENSG00000120008.111.002E-6035692gtex_brain_ba24
rs706754710122646566WDR11ENSG00000120008.111.002E-6035879gtex_brain_ba24
rs706766810122646643WDR11ENSG00000120008.111.002E-6035956gtex_brain_ba24
rs706771910122646738WDR11ENSG00000120008.112.365E-7036051gtex_brain_ba24
rs706787710122646827WDR11ENSG00000120008.111.002E-6036140gtex_brain_ba24
rs20146676110122648304WDR11ENSG00000120008.111.32E-6037617gtex_brain_ba24
rs381371510122648310WDR11ENSG00000120008.119.955E-7037623gtex_brain_ba24
rs709359310122648864WDR11ENSG00000120008.118.574E-7038177gtex_brain_ba24
rs709399410122649033WDR11ENSG00000120008.119.632E-7038346gtex_brain_ba24
rs475247110122650598WDR11ENSG00000120008.111.002E-6039911gtex_brain_ba24
rs475247210122650655WDR11ENSG00000120008.112.365E-7039968gtex_brain_ba24
rs1119963110122654120WDR11ENSG00000120008.111.002E-6043433gtex_brain_ba24
rs790174210122654405WDR11ENSG00000120008.111.033E-6043718gtex_brain_ba24
rs143946710122654807WDR11ENSG00000120008.111.002E-6044120gtex_brain_ba24
rs143946610122654969WDR11ENSG00000120008.111.002E-6044282gtex_brain_ba24
rs1088679510122655311WDR11ENSG00000120008.119.211E-8044624gtex_brain_ba24
rs75486910122655718WDR11ENSG00000120008.116.979E-7045031gtex_brain_ba24
rs75487010122655884WDR11ENSG00000120008.111.203E-7045197gtex_brain_ba24
rs14119883610122655971WDR11ENSG00000120008.116.979E-7045284gtex_brain_ba24
rs1241509110122656619WDR11ENSG00000120008.119.211E-8045932gtex_brain_ba24
rs1119963310122657094WDR11ENSG00000120008.111.002E-6046407gtex_brain_ba24
rs1088679610122657314WDR11ENSG00000120008.111.002E-6046627gtex_brain_ba24
rs658567310122657938WDR11ENSG00000120008.112.365E-7047251gtex_brain_ba24
rs658567410122658017WDR11ENSG00000120008.111.002E-6047330gtex_brain_ba24
rs658567510122658334WDR11ENSG00000120008.119.592E-7047647gtex_brain_ba24
rs1131029810122658354WDR11ENSG00000120008.116.095E-7047667gtex_brain_ba24
rs1058813110122658356WDR11ENSG00000120008.116.095E-7047669gtex_brain_ba24
rs378124710122658410WDR11ENSG00000120008.111.002E-6047723gtex_brain_ba24
rs1119963410122659078WDR11ENSG00000120008.116.896E-7048391gtex_brain_ba24
rs228933610122659490WDR11ENSG00000120008.111.025E-6048803gtex_brain_ba24
rs381617210122659853WDR11ENSG00000120008.119.969E-7049166gtex_brain_ba24
rs791108410122659968WDR11ENSG00000120008.119.969E-7049281gtex_brain_ba24
rs789656710122660077WDR11ENSG00000120008.119.969E-7049390gtex_brain_ba24
rs1119963510122660701WDR11ENSG00000120008.119.846E-7050014gtex_brain_ba24
rs1119963610122660773WDR11ENSG00000120008.119.846E-7050086gtex_brain_ba24
rs186651910122660943WDR11ENSG00000120008.119.582E-7050256gtex_brain_ba24
rs186651810122661104WDR11ENSG00000120008.119.394E-7050417gtex_brain_ba24
rs186651710122661343WDR11ENSG00000120008.118.574E-7050656gtex_brain_ba24
rs1088679710122662381WDR11ENSG00000120008.116E-7051694gtex_brain_ba24
rs39780467110122663086WDR11ENSG00000120008.111.085E-6052399gtex_brain_ba24
rs1119963710122663950WDR11ENSG00000120008.113.269E-7053263gtex_brain_ba24
rs1088679810122664388WDR11ENSG00000120008.112.821E-7053701gtex_brain_ba24
rs374030610122665310WDR11ENSG00000120008.112.367E-7054623gtex_brain_ba24
rs374030710122665459WDR11ENSG00000120008.114.723E-8054772gtex_brain_ba24
rs153011610122667022WDR11ENSG00000120008.119.211E-8056335gtex_brain_ba24
rs6719960710122667130WDR11ENSG00000120008.116.141E-8056443gtex_brain_ba24
rs1078812810122667844WDR11ENSG00000120008.111.016E-7057157gtex_brain_ba24
rs707712610122668296WDR11ENSG00000120008.111.016E-7057609gtex_brain_ba24
rs7178772410122668353WDR11ENSG00000120008.111.001E-7057666gtex_brain_ba24
rs1088680010122668412WDR11ENSG00000120008.115.856E-8057725gtex_brain_ba24
rs104515410122668604WDR11ENSG00000120008.112.367E-7057917gtex_brain_ba24
rs104517010122668782WDR11ENSG00000120008.111.353E-6058095gtex_brain_ba24
rs104517910122668801WDR11ENSG00000120008.111.002E-6058114gtex_brain_ba24
rs475247410122669083WDR11ENSG00000120008.118.738E-7058396gtex_brain_ba24
rs1012837110122669315WDR11ENSG00000120008.118.617E-7058628gtex_brain_ba24
rs1119964010122669503WDR11ENSG00000120008.118.617E-7058816gtex_brain_ba24
rs1119964110122669551WDR11ENSG00000120008.118.617E-7058864gtex_brain_ba24
rs1224735510122669583WDR11ENSG00000120008.111.29E-6058896gtex_brain_ba24
rs3403538710122669715WDR11ENSG00000120008.112.023E-6059028gtex_brain_ba24
rs72970410122670338WDR11ENSG00000120008.111.662E-6059651gtex_brain_ba24
rs1225073610122676571WDR11ENSG00000120008.111.666E-6065884gtex_brain_ba24
rs1225098110122676901WDR11ENSG00000120008.111.666E-6066214gtex_brain_ba24
rs475180710122677001WDR11ENSG00000120008.118.638E-7066314gtex_brain_ba24
rs475180910122677256WDR11ENSG00000120008.118.638E-7066569gtex_brain_ba24
rs475181010122677278WDR11ENSG00000120008.118.638E-7066591gtex_brain_ba24
rs709469510122677426WDR11ENSG00000120008.118.638E-7066739gtex_brain_ba24
rs1078812910122677868WDR11ENSG00000120008.111.674E-6067181gtex_brain_ba24
rs1088680310122678080WDR11ENSG00000120008.117.068E-7067393gtex_brain_ba24
rs1277978210122678440WDR11ENSG00000120008.118.597E-7067753gtex_brain_ba24
rs1088680410122678682WDR11ENSG00000120008.118.853E-7067995gtex_brain_ba24
rs463021110122678783WDR11ENSG00000120008.119.087E-7068096gtex_brain_ba24
rs3495617010122681777WDR11ENSG00000120008.119.255E-7071090gtex_brain_ba24
rs3495074210122681802WDR11ENSG00000120008.119.127E-7071115gtex_brain_ba24
rs1276638510122685062WDR11ENSG00000120008.114.392E-7074375gtex_brain_ba24
rs199164310122687735WDR11ENSG00000120008.116.886E-7077048gtex_brain_ba24
rs1710118710122714701WDR11ENSG00000120008.112.027E-60104014gtex_brain_ba24
rs1278258610122720568WDR11ENSG00000120008.111.956E-60109881gtex_brain_ba24
rs299722710122585852WDR11ENSG00000120008.115.19E-70-24835gtex_brain_putamen_basal
rs1088678010122601003WDR11ENSG00000120008.119.524E-70-9684gtex_brain_putamen_basal
rs1119959110122604051WDR11ENSG00000120008.117.187E-70-6636gtex_brain_putamen_basal
rs1088678510122610391WDR11ENSG00000120008.111.877E-70-296gtex_brain_putamen_basal
rs165959710122610646WDR11ENSG00000120008.115.601E-70-41gtex_brain_putamen_basal
rs1119959810122610657WDR11ENSG00000120008.114.882E-90-30gtex_brain_putamen_basal
rs19953991210122611525WDR11ENSG00000120008.111.536E-100838gtex_brain_putamen_basal
rs7220169510122611526WDR11ENSG00000120008.111.892E-100839gtex_brain_putamen_basal
rs39811484910122612574WDR11ENSG00000120008.116.355E-1001887gtex_brain_putamen_basal
rs1225553910122614377WDR11ENSG00000120008.112.044E-703690gtex_brain_putamen_basal
rs1224220410122614597WDR11ENSG00000120008.111.517E-1003910gtex_brain_putamen_basal
rs709253710122614904WDR11ENSG00000120008.111.517E-1004217gtex_brain_putamen_basal
rs709297710122615221WDR11ENSG00000120008.111.517E-1004534gtex_brain_putamen_basal
rs707504710122615258WDR11ENSG00000120008.111.517E-1004571gtex_brain_putamen_basal
rs1088678710122615653WDR11ENSG00000120008.116.617E-1004966gtex_brain_putamen_basal
rs790415310122616062WDR11ENSG00000120008.116.736E-1005375gtex_brain_putamen_basal
rs76879810122616358WDR11ENSG00000120008.116.664E-1005671gtex_brain_putamen_basal
rs76879910122616604WDR11ENSG00000120008.113.755E-905917gtex_brain_putamen_basal
rs1119960110122616706WDR11ENSG00000120008.111.517E-1006019gtex_brain_putamen_basal
rs1119960210122616895WDR11ENSG00000120008.111.517E-1006208gtex_brain_putamen_basal
rs20031405610122617057WDR11ENSG00000120008.112.803E-906370gtex_brain_putamen_basal
rs3496637310122617061WDR11ENSG00000120008.112.803E-906374gtex_brain_putamen_basal
rs224184610122618148WDR11ENSG00000120008.112.044E-707461gtex_brain_putamen_basal
rs1235963310122618810WDR11ENSG00000120008.111.49E-1008123gtex_brain_putamen_basal
rs1088678810122620251WDR11ENSG00000120008.116.506E-1009564gtex_brain_putamen_basal
rs1119960410122620616WDR11ENSG00000120008.111.517E-1009929gtex_brain_putamen_basal
rs3568858210122621303WDR11ENSG00000120008.111.517E-10010616gtex_brain_putamen_basal
rs1710100110122621384WDR11ENSG00000120008.111.517E-10010697gtex_brain_putamen_basal
rs3527076210122621663WDR11ENSG00000120008.111.13E-9010976gtex_brain_putamen_basal
rs375850710122622838WDR11ENSG00000120008.111.461E-10012151gtex_brain_putamen_basal
rs1226305110122623342WDR11ENSG00000120008.111.517E-10012655gtex_brain_putamen_basal
rs709274710122624202WDR11ENSG00000120008.116.482E-10013515gtex_brain_putamen_basal
rs707691110122624270WDR11ENSG00000120008.116.494E-10013583gtex_brain_putamen_basal
rs1088678910122624679WDR11ENSG00000120008.111.517E-10013992gtex_brain_putamen_basal
rs321746910122625868WDR11ENSG00000120008.116.904E-7015181gtex_brain_putamen_basal
rs228933510122626038WDR11ENSG00000120008.111.652E-9015351gtex_brain_putamen_basal
rs475246810122626953WDR11ENSG00000120008.114.882E-9016266gtex_brain_putamen_basal
rs1119960810122627668WDR11ENSG00000120008.114.306E-10016981gtex_brain_putamen_basal
rs5979191510122628616WDR11ENSG00000120008.111.645E-10017929gtex_brain_putamen_basal
rs20196425310122628617WDR11ENSG00000120008.111.651E-10017930gtex_brain_putamen_basal
rs708269510122629088WDR11ENSG00000120008.115.937E-10018401gtex_brain_putamen_basal
rs14453386010122629297WDR11ENSG00000120008.111.867E-8018610gtex_brain_putamen_basal
rs1235568410122629363WDR11ENSG00000120008.114.835E-9018676gtex_brain_putamen_basal
rs1235567410122629393WDR11ENSG00000120008.111.271E-10018706gtex_brain_putamen_basal
rs463985310122629423WDR11ENSG00000120008.115.631E-10018736gtex_brain_putamen_basal
rs427414610122629522WDR11ENSG00000120008.111.485E-10018835gtex_brain_putamen_basal
rs454854610122629579WDR11ENSG00000120008.111.284E-9018892gtex_brain_putamen_basal
rs462063910122629743WDR11ENSG00000120008.111.932E-10019056gtex_brain_putamen_basal
rs932556910122631067WDR11ENSG00000120008.114.603E-9020380gtex_brain_putamen_basal
rs1046615710122633086WDR11ENSG00000120008.111.243E-10022399gtex_brain_putamen_basal
rs708055010122633607WDR11ENSG00000120008.112.037E-9022920gtex_brain_putamen_basal
rs1119961910122634099WDR11ENSG00000120008.111.253E-10023412gtex_brain_putamen_basal
rs1119962010122634104WDR11ENSG00000120008.111.284E-10023417gtex_brain_putamen_basal
rs3435203210122634406WDR11ENSG00000120008.112.092E-7023719gtex_brain_putamen_basal
rs1278424910122634955WDR11ENSG00000120008.111.517E-10024268gtex_brain_putamen_basal
rs1224748410122635088WDR11ENSG00000120008.111.517E-10024401gtex_brain_putamen_basal
rs197285810122635232WDR11ENSG00000120008.114.51E-10024545gtex_brain_putamen_basal
rs1088679110122635524WDR11ENSG00000120008.114.882E-9024837gtex_brain_putamen_basal
rs200037810122636139WDR11ENSG00000120008.113.586E-10025452gtex_brain_putamen_basal
rs1088679210122636553WDR11ENSG00000120008.111.517E-10025866gtex_brain_putamen_basal
rs790798610122637544WDR11ENSG00000120008.111.798E-10026857gtex_brain_putamen_basal
rs199227410122638073WDR11ENSG00000120008.111.517E-10027386gtex_brain_putamen_basal
rs375850810122638836WDR11ENSG00000120008.113.604E-10028149gtex_brain_putamen_basal
rs375850910122638860WDR11ENSG00000120008.111.517E-10028173gtex_brain_putamen_basal
rs375851010122639170WDR11ENSG00000120008.113.604E-10028483gtex_brain_putamen_basal
rs475180210122639311WDR11ENSG00000120008.111.517E-10028624gtex_brain_putamen_basal
rs475180310122639741WDR11ENSG00000120008.113.604E-10029054gtex_brain_putamen_basal
rs475180410122639901WDR11ENSG00000120008.113.604E-10029214gtex_brain_putamen_basal
rs475180510122640243WDR11ENSG00000120008.113.604E-10029556gtex_brain_putamen_basal
rs39779321610122641014WDR11ENSG00000120008.113.591E-10030327gtex_brain_putamen_basal
rs475180610122641325WDR11ENSG00000120008.113.604E-10030638gtex_brain_putamen_basal
rs1088679310122641884WDR11ENSG00000120008.111.517E-10031197gtex_brain_putamen_basal
rs13855834110122642050WDR11ENSG00000120008.117.665E-8031363gtex_brain_putamen_basal
rs5974005810122642060WDR11ENSG00000120008.111.488E-7031373gtex_brain_putamen_basal
rs792176710122642950WDR11ENSG00000120008.113.604E-10032263gtex_brain_putamen_basal
rs475246910122643597WDR11ENSG00000120008.113.604E-10032910gtex_brain_putamen_basal
rs475247010122643699WDR11ENSG00000120008.113.604E-10033012gtex_brain_putamen_basal
rs462699410122644850WDR11ENSG00000120008.113.604E-10034163gtex_brain_putamen_basal
rs440824310122644887WDR11ENSG00000120008.113.604E-10034200gtex_brain_putamen_basal
rs437236210122644992WDR11ENSG00000120008.113.604E-10034305gtex_brain_putamen_basal
rs658567210122645090WDR11ENSG00000120008.113.604E-10034403gtex_brain_putamen_basal
rs789992810122645376WDR11ENSG00000120008.113.604E-10034689gtex_brain_putamen_basal
rs790335610122645649WDR11ENSG00000120008.113.604E-10034962gtex_brain_putamen_basal
rs1078812510122646070WDR11ENSG00000120008.112.095E-7035383gtex_brain_putamen_basal
rs707952710122646113WDR11ENSG00000120008.113.604E-10035426gtex_brain_putamen_basal
rs707978110122646126WDR11ENSG00000120008.111.517E-10035439gtex_brain_putamen_basal
rs707983010122646379WDR11ENSG00000120008.113.604E-10035692gtex_brain_putamen_basal
rs706754710122646566WDR11ENSG00000120008.113.604E-10035879gtex_brain_putamen_basal
rs706766810122646643WDR11ENSG00000120008.113.604E-10035956gtex_brain_putamen_basal
rs706771910122646738WDR11ENSG00000120008.111.517E-10036051gtex_brain_putamen_basal
rs706787710122646827WDR11ENSG00000120008.113.604E-10036140gtex_brain_putamen_basal
rs20146676110122648304WDR11ENSG00000120008.112.609E-9037617gtex_brain_putamen_basal
rs381371510122648310WDR11ENSG00000120008.111.652E-10037623gtex_brain_putamen_basal
rs709359310122648864WDR11ENSG00000120008.114.291E-10038177gtex_brain_putamen_basal
rs709399410122649033WDR11ENSG00000120008.114.51E-10038346gtex_brain_putamen_basal
rs475247110122650598WDR11ENSG00000120008.113.604E-10039911gtex_brain_putamen_basal
rs475247210122650655WDR11ENSG00000120008.111.517E-10039968gtex_brain_putamen_basal
rs1088679410122652817WDR11ENSG00000120008.112.498E-9042130gtex_brain_putamen_basal
rs1119963110122654120WDR11ENSG00000120008.113.604E-10043433gtex_brain_putamen_basal
rs790174210122654405WDR11ENSG00000120008.113.604E-10043718gtex_brain_putamen_basal
rs143946710122654807WDR11ENSG00000120008.113.604E-10044120gtex_brain_putamen_basal
rs143946610122654969WDR11ENSG00000120008.113.604E-10044282gtex_brain_putamen_basal
rs1088679510122655311WDR11ENSG00000120008.114.882E-9044624gtex_brain_putamen_basal
rs75486910122655718WDR11ENSG00000120008.113.929E-8045031gtex_brain_putamen_basal
rs75487010122655884WDR11ENSG00000120008.111.246E-8045197gtex_brain_putamen_basal
rs14119883610122655971WDR11ENSG00000120008.113.929E-8045284gtex_brain_putamen_basal
rs1241509110122656619WDR11ENSG00000120008.112.035E-9045932gtex_brain_putamen_basal
rs1119963310122657094WDR11ENSG00000120008.113.604E-10046407gtex_brain_putamen_basal
rs1088679610122657314WDR11ENSG00000120008.113.604E-10046627gtex_brain_putamen_basal
rs658567310122657938WDR11ENSG00000120008.111.517E-10047251gtex_brain_putamen_basal
rs658567410122658017WDR11ENSG00000120008.113.604E-10047330gtex_brain_putamen_basal
rs658567510122658334WDR11ENSG00000120008.114.867E-10047647gtex_brain_putamen_basal
rs1131029810122658354WDR11ENSG00000120008.111.555E-9047667gtex_brain_putamen_basal
rs1058813110122658356WDR11ENSG00000120008.111.551E-9047669gtex_brain_putamen_basal
rs378124710122658410WDR11ENSG00000120008.113.604E-10047723gtex_brain_putamen_basal
rs1119963410122659078WDR11ENSG00000120008.114.554E-11048391gtex_brain_putamen_basal
rs228933610122659490WDR11ENSG00000120008.117.001E-9048803gtex_brain_putamen_basal
rs381617210122659853WDR11ENSG00000120008.113.604E-10049166gtex_brain_putamen_basal
rs791108410122659968WDR11ENSG00000120008.113.604E-10049281gtex_brain_putamen_basal
rs789656710122660077WDR11ENSG00000120008.113.604E-10049390gtex_brain_putamen_basal
rs1119963510122660701WDR11ENSG00000120008.113.604E-10050014gtex_brain_putamen_basal
rs1119963610122660773WDR11ENSG00000120008.113.604E-10050086gtex_brain_putamen_basal
rs186651910122660943WDR11ENSG00000120008.113.604E-10050256gtex_brain_putamen_basal
rs186651810122661104WDR11ENSG00000120008.113.604E-10050417gtex_brain_putamen_basal
rs186651710122661343WDR11ENSG00000120008.113.604E-10050656gtex_brain_putamen_basal
rs1088679710122662381WDR11ENSG00000120008.117.001E-9051694gtex_brain_putamen_basal
rs39780467110122663086WDR11ENSG00000120008.111.586E-9052399gtex_brain_putamen_basal
rs1119963710122663950WDR11ENSG00000120008.115.785E-10053263gtex_brain_putamen_basal
rs1088679810122664388WDR11ENSG00000120008.117.001E-9053701gtex_brain_putamen_basal
rs374030610122665310WDR11ENSG00000120008.111.517E-10054623gtex_brain_putamen_basal
rs153011610122667022WDR11ENSG00000120008.114.882E-9056335gtex_brain_putamen_basal
rs6719960710122667130WDR11ENSG00000120008.111.121E-9056443gtex_brain_putamen_basal
rs1078812810122667844WDR11ENSG00000120008.113.604E-10057157gtex_brain_putamen_basal
rs707712610122668296WDR11ENSG00000120008.113.604E-10057609gtex_brain_putamen_basal
rs7178772410122668353WDR11ENSG00000120008.113.175E-10057666gtex_brain_putamen_basal
rs1088680010122668412WDR11ENSG00000120008.112.095E-7057725gtex_brain_putamen_basal
rs104515410122668604WDR11ENSG00000120008.111.517E-10057917gtex_brain_putamen_basal
rs104517010122668782WDR11ENSG00000120008.111.517E-10058095gtex_brain_putamen_basal
rs104517910122668801WDR11ENSG00000120008.113.604E-10058114gtex_brain_putamen_basal
rs475247410122669083WDR11ENSG00000120008.113.637E-10058396gtex_brain_putamen_basal
rs1012837110122669315WDR11ENSG00000120008.113.604E-10058628gtex_brain_putamen_basal
rs1119964010122669503WDR11ENSG00000120008.113.604E-10058816gtex_brain_putamen_basal
rs1119964110122669551WDR11ENSG00000120008.113.414E-10058864gtex_brain_putamen_basal
rs1224735510122669583WDR11ENSG00000120008.116.455E-9058896gtex_brain_putamen_basal
rs3403538710122669715WDR11ENSG00000120008.113.261E-10059028gtex_brain_putamen_basal
rs72970410122670338WDR11ENSG00000120008.111.517E-10059651gtex_brain_putamen_basal
rs1225073610122676571WDR11ENSG00000120008.111.517E-10065884gtex_brain_putamen_basal
rs1225098110122676901WDR11ENSG00000120008.111.517E-10066214gtex_brain_putamen_basal
rs475180710122677001WDR11ENSG00000120008.113.604E-10066314gtex_brain_putamen_basal
rs475180910122677256WDR11ENSG00000120008.113.604E-10066569gtex_brain_putamen_basal
rs475181010122677278WDR11ENSG00000120008.113.604E-10066591gtex_brain_putamen_basal
rs709469510122677426WDR11ENSG00000120008.113.604E-10066739gtex_brain_putamen_basal
rs1078812910122677868WDR11ENSG00000120008.111.517E-10067181gtex_brain_putamen_basal
rs1088680310122678080WDR11ENSG00000120008.112.065E-7067393gtex_brain_putamen_basal
rs1277978210122678440WDR11ENSG00000120008.113.011E-10067753gtex_brain_putamen_basal
rs1088680410122678682WDR11ENSG00000120008.113.604E-10067995gtex_brain_putamen_basal
rs3495617010122681777WDR11ENSG00000120008.111.618E-7071090gtex_brain_putamen_basal
rs3495074210122681802WDR11ENSG00000120008.112.435E-7071115gtex_brain_putamen_basal
rs1276638510122685062WDR11ENSG00000120008.114.894E-7074375gtex_brain_putamen_basal
rs199164310122687735WDR11ENSG00000120008.117.661E-9077048gtex_brain_putamen_basal
rs1680410122709822WDR11ENSG00000120008.115.87E-8099135gtex_brain_putamen_basal
rs1710118710122714701WDR11ENSG00000120008.113.01E-80104014gtex_brain_putamen_basal
rs39784721210122718108WDR11ENSG00000120008.114.621E-80107421gtex_brain_putamen_basal
rs1278258610122720568WDR11ENSG00000120008.113.391E-70109881gtex_brain_putamen_basal
rs1278453610122722887WDR11ENSG00000120008.113.103E-70112200gtex_brain_putamen_basal

Section II. Transcriptome annotation

General gene expression (GTEx)

Not available

Gene expression of temporal and spatial changes (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.

Top co-expressed genes in brain regions

Top 10 positively co-expressed genes
GenePearson's Correlation Spearman's Correlation
CEP1100.900.77
CENPJ0.880.82
ZNF5280.860.79
STK380.860.77
STIL0.860.76
NARG1L0.860.80
C4orf210.860.74
CCDC180.860.70
RBL10.860.76
ZNF5590.850.75
Top 10 negatively co-expressed genes
GenePearson's Correlation Spearman's Correlation
FBXO2-0.59-0.79
ALDOC-0.58-0.77
LHPP-0.58-0.69
HLA-F-0.57-0.73
AIFM3-0.57-0.74
PTH1R-0.56-0.72
TNFSF12-0.56-0.74
LDHD-0.56-0.74
HLA-C-0.55-0.69
ACYP2-0.55-0.71

Section III. Gene Ontology annotation

Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0004252serine-type endopeptidase activityIEAglutamate (GO term level: 7)-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0006508proteolysisIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0016020membraneIEA-
GO:0016021integral to membraneIEA-

Section V. Pathway annotation

Pathway namePathway size# SZGR 2.0 genes in pathwayInfo
NAKAMURA TUMOR ZONE PERIPHERAL VS CENTRAL DN 634384All SZGR 2.0 genes in this pathway
FULCHER INFLAMMATORY RESPONSE LECTIN VS LPS DN 463290All SZGR 2.0 genes in this pathway
DIAZ CHRONIC MEYLOGENOUS LEUKEMIA UP 1382904All SZGR 2.0 genes in this pathway
RODRIGUES THYROID CARCINOMA POORLY DIFFERENTIATED DN 805505All SZGR 2.0 genes in this pathway
HAMAI APOPTOSIS VIA TRAIL UP 584356All SZGR 2.0 genes in this pathway
LASTOWSKA NEUROBLASTOMA COPY NUMBER DN 800473All SZGR 2.0 genes in this pathway
SHEN SMARCA2 TARGETS UP 424268All SZGR 2.0 genes in this pathway
KIM GERMINAL CENTER T HELPER UP 6642All SZGR 2.0 genes in this pathway
MONNIER POSTRADIATION TUMOR ESCAPE DN 373196All SZGR 2.0 genes in this pathway
ACEVEDO LIVER CANCER UP 973570All SZGR 2.0 genes in this pathway
ZHANG BREAST CANCER PROGENITORS UP 425253All SZGR 2.0 genes in this pathway
CHANGOLKAR H2AFY TARGETS UP 4828All SZGR 2.0 genes in this pathway

Section VI. microRNA annotation

miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-369-3p7387441Ahsa-miR-369-3pAAUAAUACAUGGUUGAUCUUU
miR-3747387451A,m8hsa-miR-374UUAUAAUACAACCUGAUAAGUG
miR-5393233291Ahsa-miR-539GGAGAAAUUAUCCUUGGUGUGU