Gene Page: FAM103A1
Summary ?
| GeneID | 83640 |
| Symbol | FAM103A1 |
| Synonyms | C15orf18|HsT19360|RAM |
| Description | family with sequence similarity 103 member A1 |
| Reference | MIM:614547|HGNC:HGNC:31022|Ensembl:ENSG00000169612|HPRD:12845|Vega:OTTHUMG00000147357 |
| Gene type | protein-coding |
| Map location | 15q25.2 |
| Pascal p-value | 0.018 |
Gene in Data Sources
| Gene set name | Method of gene set | Description | Info |
|---|---|---|---|
| CV:PGCnp | Genome-wide Association Study | GWAS |
Section I. Genetics and epigenetics annotation
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
Top co-expressed genes in brain regions
| Top 10 positively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| C6orf165 | 0.88 | 0.61 |
| SPATA17 | 0.88 | 0.54 |
| WDR78 | 0.88 | 0.57 |
| C20orf26 | 0.87 | 0.58 |
| RSHL1 | 0.87 | 0.45 |
| WDR69 | 0.87 | 0.54 |
| ROPN1L | 0.87 | 0.55 |
| C1orf88 | 0.87 | 0.38 |
| ZMYND10 | 0.86 | 0.55 |
| DNAH9 | 0.86 | 0.47 |
| Top 10 negatively co-expressed genes | ||
| Gene | Pearson's Correlation | Spearman's Correlation |
| AF347015.2 | -0.26 | -0.31 |
| AF347015.8 | -0.25 | -0.29 |
| AF347015.33 | -0.25 | -0.30 |
| AF347015.15 | -0.24 | -0.29 |
| MT-CO2 | -0.23 | -0.25 |
| AF347015.18 | -0.23 | -0.29 |
| TINAGL1 | -0.23 | -0.28 |
| AF347015.26 | -0.23 | -0.29 |
| MT-CYB | -0.22 | -0.27 |
| TBX1 | -0.22 | -0.24 |
Section V. Pathway annotation
| Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
|---|---|---|---|
| NUYTTEN EZH2 TARGETS DN | 1024 | 594 | All SZGR 2.0 genes in this pathway |
| SCHAEFFER PROSTATE DEVELOPMENT 6HR UP | 176 | 115 | All SZGR 2.0 genes in this pathway |
| PETRETTO HEART MASS QTL CIS UP | 28 | 15 | All SZGR 2.0 genes in this pathway |
| MARSON BOUND BY E2F4 UNSTIMULATED | 728 | 415 | All SZGR 2.0 genes in this pathway |
| ZHANG BREAST CANCER PROGENITORS DN | 145 | 93 | All SZGR 2.0 genes in this pathway |
| CADWELL ATG16L1 TARGETS DN | 70 | 43 | All SZGR 2.0 genes in this pathway |
| JOHNSTONE PARVB TARGETS 3 DN | 918 | 550 | All SZGR 2.0 genes in this pathway |
| JUBAN TARGETS OF SPI1 AND FLI1 DN | 92 | 60 | All SZGR 2.0 genes in this pathway |