Gene Page: PRY
Summary ?
GeneID | 9081 |
Symbol | PRY |
Synonyms | PRY1|PTPN13LY |
Description | PTPN13-like, Y-linked |
Reference | MIM:400019|HGNC:HGNC:14024|Ensembl:ENSG00000169789|HPRD:02460|Vega:OTTHUMG00000043845 |
Gene type | protein-coding |
Map location | Yq11.223 |
Gene in Data Sources
Gene set name | Method of gene set | Description | Info |
---|---|---|---|
PMID:cooccur | High-throughput literature-search | Systematic search in PubMed for genes co-occurring with SCZ keywords. A total of 3027 genes were included. | |
Literature | High-throughput literature-search | Co-occurance with Schizophrenia keywords: schizophrenia,schizophrenias | Click to show details |
Section I. Genetics and epigenetics annotation
Section II. Transcriptome annotation
General gene expression (GTEx)
Gene expression of temporal and spatial changes (BrainSpan)
Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes the lower 25% and upper 25% of the expression distribution.
Top co-expressed genes in brain regions
Top 10 positively co-expressed genes | ||
Gene | Pearson's Correlation | Spearman's Correlation |
SFRS11 | 0.90 | 0.90 |
RBM39 | 0.89 | 0.91 |
LUC7L2 | 0.88 | 0.89 |
UHRF2 | 0.87 | 0.88 |
SF3B1 | 0.87 | 0.92 |
RSRC2 | 0.87 | 0.83 |
ZNF354B | 0.87 | 0.91 |
SDCCAG10 | 0.86 | 0.85 |
SLC24A5 | 0.86 | 0.86 |
PRPF38B | 0.86 | 0.79 |
Top 10 negatively co-expressed genes | ||
Gene | Pearson's Correlation | Spearman's Correlation |
AF347015.31 | -0.66 | -0.84 |
MT-CO2 | -0.64 | -0.83 |
AF347015.27 | -0.63 | -0.81 |
IFI27 | -0.63 | -0.83 |
MT-CYB | -0.63 | -0.82 |
AF347015.33 | -0.62 | -0.79 |
AF347015.8 | -0.61 | -0.82 |
AF347015.15 | -0.60 | -0.81 |
HLA-F | -0.60 | -0.71 |
HIGD1B | -0.60 | -0.80 |
Section V. Pathway annotation
Pathway name | Pathway size | # SZGR 2.0 genes in pathway | Info |
---|---|---|---|
SHEN SMARCA2 TARGETS DN | 357 | 212 | All SZGR 2.0 genes in this pathway |
ACEVEDO LIVER CANCER WITH H3K9ME3 UP | 141 | 75 | All SZGR 2.0 genes in this pathway |